Chryseobacterium sp. PCH239: KBP46_14845
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Entry
KBP46_14845 CDS
T11096
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
chrh Chryseobacterium sp. PCH239
Pathway
chrh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
chrh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KBP46_14845 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chrh03400
]
KBP46_14845 (nth)
Enzymes [BR:
chrh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KBP46_14845 (nth)
DNA repair and recombination proteins [BR:
chrh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KBP46_14845 (nth)
Prokaryotic type
KBP46_14845 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
HHH_5
DUF3349
Motif
Other DBs
NCBI-ProteinID:
QWT84771
LinkDB
All DBs
Position
complement(3209919..3210539)
Genome browser
AA seq
206 aa
AA seq
DB search
MTKKQRAELVQIELEKLYPTTPIPLDHTDPYTLMVAVALSAQTTDKKVNQVTPELFAVAG
TPQRMAKLEEFEIKELIKEIGLSNTKAKNLKKMAELLLERHNGIVPQTYEELEALPGVGH
KTASVVMSQGFGFPAFPVDTHIHRLMTQWKLTSGKNVVETERDAKKLFPEEVWNKLHLQI
IFYGREYSPARGKGEKDFITKMMFEK
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaaacaaagagctgagctcgttcagatagaactggaaaaattatatcccact
acacctattccgttagatcacactgatccctatacattgatggttgccgtagcactttct
gcacaaactacagataaaaaagtaaatcaggttactcccgaactttttgcggtagcagga
acaccgcaaagaatggctaagctggaagaatttgaaatcaaagaactaatcaaagaaata
ggattatctaatacgaaagccaaaaacctgaagaaaatggccgaacttctgttagaaaga
cataatggtattgttccccagacttatgaagaattggaagctcttccgggcgtagggcac
aaaacggcatcagtagtaatgagtcagggtttcggatttcctgcttttcctgtggatacc
catattcaccgtctgatgacgcagtggaaacttacttccggaaaaaatgtggtggaaaca
gaacgtgacgccaaaaaattattccctgaagaagtatggaataaacttcaccttcagatt
attttctatggaagagaatattctccggcaagaggaaaaggagagaaggattttattacg
aaaatgatgtttgaaaaataa
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