Chryseobacterium sp. PCH239: KBP46_15695
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Entry
KBP46_15695 CDS
T11096
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
chrh Chryseobacterium sp. PCH239
Pathway
chrh00300
Lysine biosynthesis
chrh00550
Peptidoglycan biosynthesis
chrh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
chrh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KBP46_15695
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KBP46_15695
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
chrh01011
]
KBP46_15695
Enzymes [BR:
chrh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
KBP46_15695
Peptidoglycan biosynthesis and degradation proteins [BR:
chrh01011
]
Precursor biosynthesis
Amino acid ligase
KBP46_15695
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Pyrid_ox_like
NPM1-C
Corona_6B_7B
Motif
Other DBs
NCBI-ProteinID:
QWT84924
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Position
complement(3384251..3385711)
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AA seq
486 aa
AA seq
DB search
MIITELVNRIPVLEIHGDNNREVTELVIDSRKVTENSLYIAMRGTVVDGHSFIASAIEKG
AATIVCEEFPETLVEHVTYVQVKDSSKALGHLASNFYGNPSQKLKLIGVTGTNGKTSVST
LLFDVFKNLGYPAALLSTVEIRIGEEVIPATHTTPDVITINRILAEAVEKGCEFAFMEVS
SHGIAQNRIEGLHFKIAGFTNLTHDHLDYHKTFEEYLKTKKRFFDQLEDTAIAITNVDDK
NGNVMLQNTKAKKKSYALKTMADYHGKLLEVDFNGMLLNFNGKEFWTTLTGKFNVYNLLL
VFGIAAELGFEQDEILQAISKLKRVSGRFETFKSDGGIFFIVDYAHTPDALENILDSIND
IRTKNERLITVFGCGGDRDHSKRPEMGNIATKKSTLAIITSDNPRTEDPAQIIKEIEAGV
EPQNFSKYTSIPDRKEAIKMAIKFAEPKDIVLVAGKGHENYQEINGVKHHFDDKEVINEL
WKLMSK
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgattataacagaattagtaaacagaatcccagtactggaaatccacggtgataataac
cgtgaggtaactgaattggtgatcgacagcagaaaggttacagaaaactctctttatatt
gccatgagaggaacagtagtggatggtcattcattcattgcctctgctattgaaaaagga
gctgccacaattgtttgcgaagaattccctgaaacattggtggaacatgtaacctatgtt
caggtaaaagattcatctaaggcattaggtcatcttgcctccaacttctacggaaaccct
tctcagaaattaaaactgataggagttacaggaactaacggaaaaacatccgtttcgacc
cttctttttgatgtctttaaaaaccttggatatccggccgctttactttctactgttgaa
atcagaattggtgaagaagttattccggcaacccacaccactcctgatgtgattaccatc
aacaggatcttggcggaagcggtagaaaaaggatgcgaatttgctttcatggaagtaagc
tcacacggaattgcccaaaatagaattgaaggactacacttcaaaatagcaggcttcacc
aaccttactcatgatcatttagattatcataaaacgttcgaagaatatttaaaaacaaag
aaaagattctttgatcaattagaagataccgctattgccatcaccaatgtggatgacaaa
aacgggaatgtcatgcttcagaacaccaaggctaaaaagaagtcttacgctttgaaaacc
atggcagactatcacgggaaattattggaagtggatttcaacggaatgctgttgaacttc
aacggaaaagagttctggacgacactgaccgggaaattcaatgtatataatttactgctt
gtctttggaattgctgctgaactaggttttgagcaggatgaaattcttcaggctatcagc
aaattaaaaagagtttccggaagatttgaaaccttcaaatccgatggtggaattttcttt
atcgtagattatgcacacactccggatgctttggaaaacattctggacagcatcaacgat
atcagaaccaaaaacgaaagattaatcaccgtattcggctgcggaggagacagagatcac
tccaaaagacctgaaatgggaaatattgccactaaaaaatcaaccctggcaatcatcact
tcagacaatccgagaacagaagatcctgcacagatcatcaaagaaattgaagcaggcgtt
gaaccacagaacttcagtaaatacacttcaattccggacagaaaagaagccataaaaatg
gccatcaagtttgcagaacctaaagatatcgttttagttgccggaaaaggacacgaaaac
tatcaggagatcaatggtgtgaaacatcattttgacgacaaagaagtaattaatgagctt
tggaaattaatgagcaaataa
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