Chryseobacterium sp. PCH239: KBP46_18985
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Entry
KBP46_18985 CDS
T11096
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
chrh Chryseobacterium sp. PCH239
Pathway
chrh01501
beta-Lactam resistance
chrh01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
chrh00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KBP46_18985
01503 Cationic antimicrobial peptide (CAMP) resistance
KBP46_18985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
chrh03036
]
KBP46_18985
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chrh02000
]
KBP46_18985
01504 Antimicrobial resistance genes [BR:
chrh01504
]
KBP46_18985
Chromosome and associated proteins [BR:
chrh03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
KBP46_18985
Transporters [BR:
chrh02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
KBP46_18985
Antimicrobial resistance genes [BR:
chrh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KBP46_18985
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
YknX_C
BSH_CusB
Biotin_lipoyl
HH_EMRA
BSH_YknX
BSH_CzcB
CzcB_C
Beta-barrel_RND_2
HH_CzcB
BSH_YhbJ
Motif
Other DBs
NCBI-ProteinID:
QWT85506
LinkDB
All DBs
Position
complement(4120375..4121535)
Genome browser
AA seq
386 aa
AA seq
DB search
MKLPGKTRFIVLIASIILLQSCTKAAEGTNAAPPAPELPVYTVITSPATTYQEFPTALEG
KNNVEIRSQVDGYLDRIYVEEGAYVRAGQPLFKIDSRSYGEQMNMAQANLQAANANIQKA
RVEVDRLQPLVAAKVVSDVQLKTAKANYEAAVAAAAQARASVGSARINVGFTTITAPVSG
YIGRIPYKKGSLISRTDVNPLTLLSDISEIYAYFSLSELDFIAFQNKYPGASLEEKLKNM
PMVDLVIADNSTYPEKGRLSIVDGQFDKTTGAISVRAVFPNANGTLRTGNTGRVRMPQLI
SNAVVIPQESTFEIQDKTYVYVMDKDKKVMGRPIKISGKTDSYYFISEGLKPGEKIVFTG
IGNLKDGASIKPKNISSDSLLKAKPL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaaattacctggaaaaacaaggtttattgtacttattgcaagtataattcttttacag
agctgcacaaaagccgcagaaggaaccaatgccgcacctccagctccagaacttccggtt
tataccgttatcacctcacccgctactacatatcaggaattcccaactgctttggaaggg
aaaaacaacgtagaaatcagatctcaggtagatggatacctggacagaatctacgtagaa
gaaggagcatatgtaagagcaggacaaccgttattcaaaatagattcaagaagttatggc
gaacagatgaatatggctcaggctaatcttcaggcggccaatgccaatattcaaaaagca
agagtagaagtagacagacttcagccgctggtggctgccaaagtagtttctgatgtacag
cttaaaaccgcaaaagccaattatgaagcggctgtagcagcagctgcacaagcgagagcc
tctgtaggaagcgccagaatcaacgtaggatttacaaccattacagctcctgtaagcggc
tatataggaagaattccttacaaaaaaggaagtctgatttcaagaacagatgtgaatcca
ttgacattactatctgatatcagtgaaatctatgcctatttctctttaagtgagcttgac
ttcattgctttccagaataaatatccgggagcaagcttagaagaaaaactgaaaaatatg
cccatggtagatctagtgattgccgacaacagtacttaccctgaaaaaggaagattaagc
attgtagacggccagtttgacaaaactaccggagccatcagtgtacgtgccgtttttcct
aatgccaacggaactttaagaaccggaaatacaggaagagtgcgtatgccacagctgatt
tctaatgcggtagttattccacaggaatctacattcgaaattcaggataaaacgtatgtc
tatgtaatggataaagataagaaagtaatgggaagacctattaaaatttcaggaaaaact
gatagctattactttatttctgaagggcttaagcctggagaaaaaattgtattcacagga
attggaaacctgaaagacggtgcttccatcaagccgaaaaatatttcttcggacagcttg
ttaaaagcaaaaccattatag
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