Chromobacterium phragmitis IIBBL 112-1: DK842_17280
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Entry
DK842_17280 CDS
T05549
Name
(GenBank) hydrophobe/amphiphile efflux-1 family RND transporter
KO
K18138
multidrug efflux pump
Organism
chri
Chromobacterium phragmitis IIBBL 112-1
Pathway
chri01501
beta-Lactam resistance
chri01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
chri00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DK842_17280
01503 Cationic antimicrobial peptide (CAMP) resistance
DK842_17280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chri02000
]
DK842_17280
01504 Antimicrobial resistance genes [BR:
chri01504
]
DK842_17280
Transporters [BR:
chri02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
DK842_17280
Antimicrobial resistance genes [BR:
chri01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DK842_17280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
AXE31493
LinkDB
All DBs
Position
complement(3659660..3662800)
Genome browser
AA seq
1046 aa
AA seq
DB search
MFSQFFINRPIFASVISIILCLAGLASMRALPIEQYPQIVPAVVSVNASYPGATPEVIAE
TVAAPLEQQINGVENMLYVQSNSSSTGKLALNVYFKVGADPDQATIDVNNRVQAALKTLP
EEVQRQGVTVRKRSTAVLSVISVNSPNGLYDRNYLANYSLLNIMDELKRIPGMGDVSMLG
GTDYAMRIWLRPDRLAQLRLTPADVVQAVREQNAQFAAGKIGAQPAGREIGFTYTVNAKG
RLATPEEFGDIIVRSEPDGAKIRLKDVARVEMGGNDYEVVGARNGKPTVGIVTYLQPNAN
ALQVAQAVRDKMAELKKRFPSGVDYAIPYDTTDFIKVSIDKVVSTLLEATVLVFAIVYLF
LQSFRATLIPCIAVPVSLIGTFAGMQLFGFSINLLTLFGMVLAIGIVVDDAIVVLENVER
ILRETGCSAKEAAIRAMREVSGPVVAIVLVLCAVFLPVAFIDGMTGVMYRQFAVTISISV
ILSGIVALTLTPALCALLLKPGHHEPARFFVWFNRLFERATARYAGGVDFINRRAALALA
LFAALLAATFLLFRAVPGSLVPDEDMGNMYVSAALPDAASLTRTIRVTQDFDQILLKHPD
IANVTTFNGFDILSGAKLPNSATSFVTLKPWEQRQGQAHGSASVAAWANRQGDSVQSARM
RAFTPAPIIGMSATGGLEAYLQDRDGAGPGKLGEATNRLLEAARKRPEFASVSTTLRADV
PQKFLDLDREKAKALGVRVDEVFDAMSATFGQLYVNDFNQFGRTYKVQLQSEADFRARPD
DIGDVHVRSEDGSMIPLTSLVTVKPSFGPELVDRFNIFGAAKILAQPAPGVSSGQAIAAL
EETAEQTLGKSFTLAWSGSAFQEKQAGNSGSLAFALGILMVFLILAAQYERWTLPLAVVT
SVPFALFGALLAAFVAGKSNDVYFQIGLVTLIGLSAKNAILIVEFAVQKLEEGMDLMEAA
LQAARLRFRPIVMTSLAFILGCVPLVASSGAGAASRHSLGLPVIGGMLAATFIATFFIPL
FFILIMKLGKQNKPQPNAEAGGNADA
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgttttcccagttcttcatcaatcgtcccattttcgccagcgtgatctccatcatcctt
tgcctggccgggctcgcctcgatgcgcgcgctgccgatcgagcaatatccgcagatcgtg
ccggcggtggtgtcggtcaacgccagctatcccggcgccacgccggaggtgatagccgaa
acggtggccgcgccgctggagcagcagatcaacggcgtggaaaacatgctgtatgtccag
tccaactcatcctccaccggcaaattggcgctgaacgtctacttcaaggtcggcgccgac
cccgaccaagccaccatcgacgtcaacaaccgcgtgcaggccgccctgaaaacgctgccg
gaagaggtgcagcgccagggcgtgaccgtgcgcaagcgttccaccgcggtgctgagcgtg
atatcggtcaattcgccaaacgggctatacgaccgcaattacctggccaattattcgctg
ctcaacatcatggacgagctcaagcgcatccccggcatgggcgatgtctccatgctgggc
ggcacggactacgcgatgcggatctggctgcggccggaccggctggcgcaattgcggctg
acgcctgccgacgtggtccaggcggtgcgcgagcagaacgcgcaattcgccgccggcaag
ataggcgcgcagcccgccggccgggaaatcggcttcacttataccgtcaatgccaaggga
cggctggccacgccggaggagttcggcgacatcatcgtgcgctccgagcctgacggcgcc
aaaatccgcctcaaggacgtggcgcgggtcgagatggggggcaacgactacgaagtggtg
ggcgcccgcaacggcaagccgactgtcggcatcgtcacttacctgcaacccaacgccaac
gcgctgcaggtggcccaggccgtgcgcgacaaaatggcggaactgaaaaaacgcttcccc
tccggcgtggactacgccattccctacgacaccaccgacttcatcaaggtctccatcgac
aaggtcgtctccacgctgttggaggccacggtgctggtcttcgccatcgtctacctgttc
ctgcagagtttccgcgccacgctgattccctgcatcgccgtgccggtgtccctgataggc
accttcgccggcatgcagctgttcggcttctccatcaatttgctgacgctgttcggcatg
gtgctggccatcggcatcgtggtggacgacgccatcgtggtgctggaaaacgtggagcgc
atcctgcgcgagaccggctgcagcgccaaggaagccgccatccgggcgatgcgcgaagtg
tcgggcccggtggtggccattgtgctggtcttgtgcgcggtgtttctgccggtggccttc
atcgacggcatgaccggcgtgatgtaccgccagttcgccgtcaccatttcgatatcggtc
atcctgtccggcatcgtggcgctgacgctgacgcccgccttgtgcgcgctgctgctcaag
cccggacatcacgagccggcgcgcttcttcgtctggttcaaccggctgttcgaacgcgcc
accgcccggtacgcgggcggcgtggatttcatcaatcgcagggccgcgctcgccctggcg
ctgttcgccgcgctgctggcggccaccttcctgctgttccgcgccgtgccgggatcgctg
gtgccggacgaggacatgggcaatatgtacgtcagcgccgcgctgccggacgccgcgtcc
ctgacccgcaccatacgcgtcacccaggatttcgaccaaatcctgctgaagcacccggac
atcgccaacgtcaccactttcaacggctttgacatcctgtccggcgccaagctgccgaac
agcgccaccagcttcgtcaccctgaagccgtgggagcagcgccaaggccaggcgcacggc
tccgccagcgtggccgcctgggccaaccgccaaggcgattcggtgcagtcggccaggatg
cgcgccttcacgccggcccccatcatcggcatgtccgctaccggcggactggaagcctac
ctgcaggaccgcgacggggccgggccgggcaagctcggcgaggccaccaaccgcctgctg
gaggcagccagaaaacgtccggagttcgcatccgtgtccaccaccctgcgcgccgacgtg
ccgcaaaaattcctggacctggaccgcgaaaaggccaaggcgctgggcgtgcgcgtcgac
gaagtgttcgacgcgatgtcggccaccttcggccagctgtatgtgaacgacttcaaccag
ttcggccgcacttacaaagtccagcttcaatcggaagccgacttccgggcccgcccggat
gatatcggcgatgtccatgtgcgctcggaagacggcagcatgatcccgctcaccagcctg
gtcacggtgaagccgagcttcggtccggaactggtcgatcgcttcaacattttcggcgca
gccaaaatcctggcccagcccgcgcccggcgtcagctccggccaggccatcgccgcgctg
gaggaaacggcggagcaaacgctgggcaagagcttcacgctggcctggagcggcagcgcc
tttcaggagaaacaagccggcaacagcggcagcctggccttcgccctgggcatcctgatg
gtgttcctgatcctggcggcgcagtatgagcgctggacgttgccgttggccgtggtgaca
tccgtgccgttcgcgctgttcggcgcgctgctggctgccttcgtggccggcaaaagcaac
gatgtctatttccagatcgggctagtgacgctgatcggcctgtcggccaagaacgcgatt
ctgatcgtcgagttcgcggtgcagaagctggaagaaggcatggacctgatggaggccgcg
ctgcaggccgcccgcctgcgcttccgccccatcgtgatgacctcgctcgccttcatcctg
ggctgcgtccccctcgtcgcgtcttccggcgcgggggcggccagccggcattccctggga
ctgccggtcatcggcggcatgctggccgccaccttcatcgccaccttcttcatcccgctg
ttcttcatcctgatcatgaagctcggcaaacagaacaagcctcagccaaacgccgaggcc
ggaggaaacgcagatgcttaa
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integrated database retrieval system
