Chromobacterium phragmitis IIBBL 112-1: DK842_18575
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Entry
DK842_18575 CDS
T05549
Name
(GenBank) hydrophobe/amphiphile efflux-1 family RND transporter
KO
K18138
multidrug efflux pump
Organism
chri
Chromobacterium phragmitis IIBBL 112-1
Pathway
chri01501
beta-Lactam resistance
chri01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
chri00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DK842_18575
01503 Cationic antimicrobial peptide (CAMP) resistance
DK842_18575
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chri02000
]
DK842_18575
01504 Antimicrobial resistance genes [BR:
chri01504
]
DK842_18575
Transporters [BR:
chri02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
DK842_18575
Antimicrobial resistance genes [BR:
chri01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DK842_18575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF4232
Motif
Other DBs
NCBI-ProteinID:
AXE31727
LinkDB
All DBs
Position
3913067..3916195
Genome browser
AA seq
1042 aa
AA seq
DB search
MLARFFIGRPVFAWVLAIVIMLAGLFALRALPVSQYPDIAPPTVMVSASYPGASAQVVET
SVIQVLEQELKGLDNLMYFSSTSSSSGQAEIMLTFRQGANADTAQVQVQNKVSQMLARLP
QQVQQNGLSVQKMQGDFLLIASFYDVSGQRSDTDIADWLASNVQDPLSRVGGVGSVRAFG
APYAMRVWLDPHKLNSYGLIPSDVSAAISKQNTEVSVGELGALPSPPGQQLNAMVTAWSR
LSTPEQFRDIVVKALPDGGAVRLGDVARVELGQEDYSSSSRLNGHPASGLAVMLAPGANA
LATAEAVKARVAELERNFPPGIRVAYPEDTTHFVRLSIRAVMATLLEAVALVVLVMYVFL
RNWRATLIPALTVPVVLLGTFGVLAAAGFGINTLTLFGMVLAIGLLVDDAIVVVENVERV
MSEEGLDARAATVRSMGEIGGALVGIGLVLGAVFLPMAFFGGSVGVIYRQFSITIVAAMA
LSVLTALTLTPALCATLLRPHAPSERGPLAAFERRFQRLQSDYAGRWLPAWLRRPLRGGL
VYLALVAALAALYPRLPTAFIPDEDQGTVMAQFTLPTGATHQRADKVARAVEQHFLETEK
ANVESVYMLSGFSFGGSGQNAGMAFVALKDWSQRRGQENSAQAIADRATAALAAQRDAEV
FGMVLPPIGGLGQTNGFEFWLQDASGQGREHLAKARDQLLKAAQGGDRLSAVRSGAADDK
PQLRLDVDQSKAAALGLDPANVADTLGAAWGGRYINDFIDRGRVKKVMMQADAPYRSKPE
DLGLWFVRGADGAMTPFSAFARARWEYGPAQLNRYNGLPALPLSGSAAAGVSSGEAMKAV
EAIAGKLPGTQYEWSGLSYQDRLSSGQTPLLYAVSILFVFLCLAALYESWLVPCAAMTAI
PLGVLGAVLAVMARGLSNDIYFQVGLLTTIGLSAKNAILIIEFAEAAIRRGAAPLEAALA
AARQRLRPILMTSLAFGVGVAPLVWAGGPGAGSQNAIGAAVLGGVMSATLLTLFFVPLAH
LLIRGLAGQVAQRRLKLAEARP
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgctggcgcgtttcttcataggccgcccggtgttcgcctgggtgctggccatcgtcatc
atgctggccggcctgttcgccttgcgcgcgctgccggtgtcgcagtatccggacatcgct
ccgccgacggtgatggtcagcgccagctaccccggcgcgtccgcccaggtggtggagacc
agcgtgatccaggtgctggagcaagagctgaagggcctggacaatctgatgtatttcagc
tccaccagctcctcgtccggccaggccgagatcatgctcaccttccgccagggcgccaac
gccgacaccgcccaggtgcaggtgcagaacaaggtcagccagatgctggcgcggctgccg
cagcaagtgcagcagaacggcctgtcggtgcagaagatgcagggcgacttcctgctgatc
gcctccttttatgatgtcagcggccagcgcagcgacaccgacatcgccgactggctggcc
agcaatgtgcaagacccgctgagccgggtgggcggcgtcggctcggtgcgggccttcggc
gcgccgtacgcgatgcgcgtgtggctggacccgcacaagctcaacagctacggcctgatt
ccctccgacgtcagcgccgccatctccaagcagaacaccgaggtctcggtcggcgaactg
ggcgccttgccgtcgccgccgggccagcagctgaacgcgatggtcaccgcctggtcgcgc
ttgtccacgcctgagcagttccgagacattgtcgtcaaggcgctgccggacggcggcgcg
gtgcggctgggcgacgtggcgcgggtggaactggggcaggaggattacagcagcagttcg
cggctgaacggccacccggcctcgggcctggcggtgatgctggcgccgggcgccaacgcg
ctggccaccgccgaggcagtgaaggcgcgcgtcgccgagctggagcgcaactttccgccg
ggcatccgcgtcgcctatccggaggacaccacccacttcgtcaggctgtcgatacgcgcg
gtgatggcgacgctgctggaggcggtggcgctggtggtgctggtgatgtacgtgttcctg
cgcaactggcgcgcgacgctgattccggcgctgacggtgccggtggtgctgctgggcacg
ttcggcgtgctggcggcggccggcttcggcatcaatacgctgaccttgttcggcatggtg
ctggccatcggcctgttggtcgacgacgccatcgtggtggtggagaacgtcgagcgggtg
atgagcgaggaggggctggacgcgcgcgcggccaccgtccgttcgatgggcgagatcggc
ggcgcgctggtcggcatcggcctggtgctgggggctgtgttcctgccgatggccttcttc
ggcggctcggtcggcgtcatctaccgccaattctcgatcaccatcgtcgcggcgatggcc
ttgtcggtgctgaccgcgctgaccctgacgccagccctgtgcgcgacgctgctgcggccg
catgcgccgtccgaacgcggcccgctggctgcgttcgagcgccgcttccagcgtttgcaa
tcggactatgccggccgctggctgccggcttggctgcgtcgcccgctgcgcggcggcttg
gtctacttggcgctggtggcggcgctggccgcgctgtacccgcggttgcccactgccttc
atcccggacgaggaccagggcacggtgatggcgcagttcacgctgcccaccggggccacc
catcagcgcgccgacaaggtggcgcgcgcggtggagcagcatttcctggaaaccgagaag
gccaatgtcgaatcggtgtacatgttgtccggcttcagcttcggcggttccggccagaac
gccggcatggccttcgtcgcgttgaaggactggtcgcagcggcgcggccaagagaacagc
gcccaggcgatagccgaccgcgccaccgccgcgctggccgcgcagcgggacgccgaggtg
ttcggcatggtgctgccgcccatcggtggcttggggcagaccaatggcttcgaattttgg
ctgcaggacgcgtcgggccagggccgcgagcatctggccaaggcgcgcgaccagctgctg
aaggcggcccagggaggtgacaggctcagcgcggtgcgctccggcgccgccgacgacaag
ccgcaattgcggctggatgtcgaccaaagcaaggccgccgcgctggggctggacccggcc
aatgtcgccgacacgctgggcgcggcctggggcgggcgctacatcaacgacttcatcgac
cgcggccgggtgaagaaggtgatgatgcaggccgacgcgccttaccgttccaagcccgag
gatctgggcttgtggttcgtccgcggcgcggacggcgcgatgacgccgttttccgccttc
gcccgcgcgcgctgggaatacgggccggcgcagctgaaccgctacaacggcctgccggcg
ctgcccttgtcgggctcggccgccgccggcgtcagttccggcgaggcgatgaaggcggtg
gaggcgatagccggcaagctgccgggcacgcagtacgagtggagcgggctgtcttatcag
gatcggctgtccagcggccagacgccgctgctgtacgcggtgtcgatattgttcgtcttc
ctgtgcctggcggcgctgtacgaaagctggctggtgccgtgcgccgcgatgacggcgatt
ccgctgggcgtgctgggcgcggtgctggcggtgatggcgcgcggcctgtccaacgacatc
tatttccaggtgggtctgctgacgacgataggcctatcggccaagaacgccatcctgatc
atcgagttcgccgaggcggcgatccggcgcggcgcggctccgctggaggcggcgctggcc
gccgcccgccagcggctgcggccgatattgatgacctcgctggctttcggcgtcggcgtc
gcgccgctggtctgggccggcgggccgggagccggcagccagaacgcgatcggcgcggcg
gtgctgggcggcgtgatgtcggccacgctgctgacgctgtttttcgtgccgctggcgcat
ctgctgatacgcggcctggcggggcaagtcgcgcagcggcgtttgaaattggcggaggcg
aggccatga
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integrated database retrieval system
