Chryseobacterium sp. KCF3-3: KCF3NO3_16270
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Entry
KCF3NO3_16270 CDS
T11022
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
chrk Chryseobacterium sp. KCF3-3
Pathway
chrk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
chrk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KCF3NO3_16270 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chrk03400
]
KCF3NO3_16270 (nth)
Enzymes [BR:
chrk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KCF3NO3_16270 (nth)
DNA repair and recombination proteins [BR:
chrk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KCF3NO3_16270 (nth)
Prokaryotic type
KCF3NO3_16270 (nth)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
HHH_5
DUF3349
Motif
Other DBs
NCBI-ProteinID:
BFO65644
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All DBs
Position
1874210..1874830
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AA seq
206 aa
AA seq
DB search
MTKKQRAELVQIELEKLYPTTPIPLDHTDPYTLMVAVALSAQTTDKKVNQVTPDLFAVAG
TPQRMAKLEEFEIKELIKEIGLSNTKAKNLKRMAELLLERHNGIVPQTYEELEALPGVGH
KTASVVMSQGFGFPAFPVDTHIHRLMTQWKLTSGKNVVETERDAKNLFPEEVWNKLHLQI
IFYGREYSPARGKGEKDFITKMMFEK
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaaacaaagagctgagctcgttcagatagaactggaaaaattatatcccact
acacctattccgttagatcataccgatccctatacattgatggttgctgtagcgctttct
gcgcagactacagacaaaaaagttaatcaggttacgcctgatctttttgccgtggcagga
actccccaaagaatggccaaactggaagaatttgaaatcaaagagctgatcaaagaaatc
ggactttccaatacaaaggctaaaaacctgaagagaatggcagaacttctgctggaaaga
cataatggtattgttccacagacttatgaggaattagaagcacttcctggagtagggcac
aagacggcttctgttgttatgagccagggatttggatttcctgcttttccggtagataca
cacattcatcgtctgatgacacaatggaaacttacctccggaaaaaatgtggtggaaaca
gagcgtgatgctaagaatttattccctgaagaagtatggaacaaacttcaccttcagatc
attttctatggaagagaatattctccggcaagaggaaaaggagagaaggattttattacg
aaaatgatgtttgagaaataa
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