Chromobacterium sp. ATCC 53434: CXB49_05070
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Entry
CXB49_05070 CDS
T05234
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
chro
Chromobacterium sp. ATCC 53434
Pathway
chro03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
chro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CXB49_05070 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chro03400
]
CXB49_05070 (nth)
Enzymes [BR:
chro01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CXB49_05070 (nth)
DNA repair and recombination proteins [BR:
chro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CXB49_05070 (nth)
Prokaryotic type
CXB49_05070 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Ogg-HhH
HHH_8
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AUH50235
UniProt:
A0A2H5DT58
LinkDB
All DBs
Position
complement(1073778..1074410)
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AA seq
210 aa
AA seq
DB search
MNAAIRQQIFERLRDATPHPTTELEYSTPFELLISVLLSAQATDVGVNKATRRLYPVANT
PAAMLALGEESLAEHIKTIGLYKTKARNVIATCRLLLEKHGGEVPQTREALEALPGVGRK
TANVVLNTAFGQPTIAVDTHIFRVANRTRIAPGKDVREVEDKLVKFVPAEFKLDAHHWLI
LHGRYVCKARKPECQRCAIADLCEYPAKPL
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgccgccatacgccaacagatcttcgagaggctgcgcgacgccaccccccatccg
accaccgaactggaatactcgacgccgttcgagctgctgatctcggtgctgctgtcggcg
caggccaccgacgtcggcgtcaacaaggccacccgccggctctacccggtggccaacacg
ccggcggcgatgctggcgctgggcgaggaaagcctggccgagcacatcaagaccataggc
ctgtacaagaccaaggccaggaacgtgatcgccacctgcaggctgctgctggaaaagcac
ggcggcgaggtgccgcagacgcgcgaggcgctggaggcgctgccgggcgtcggccgcaag
accgccaatgtggtgctgaacaccgccttcggccagccgaccatcgcggtggacacccat
atcttccgcgtcgccaaccgcacccgcatcgcgccgggcaaggacgtccgcgaggtcgag
gacaagctggtcaagttcgtgccggccgaattcaagctggacgcccaccactggctgatc
ctgcacggccgctatgtgtgcaaggccaggaaacccgaatgccagcgctgcgccatcgcc
gacctctgcgaatacccggcaaaaccgttatga
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