Chryseobacterium sp. 3008163: EAG08_01980
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Entry
EAG08_01980 CDS
T05679
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
chrs
Chryseobacterium sp. 3008163
Pathway
chrs01501
beta-Lactam resistance
chrs01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
chrs00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EAG08_01980
01503 Cationic antimicrobial peptide (CAMP) resistance
EAG08_01980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chrs02000
]
EAG08_01980
01504 Antimicrobial resistance genes [BR:
chrs01504
]
EAG08_01980
Transporters [BR:
chrs02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
EAG08_01980
Antimicrobial resistance genes [BR:
chrs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EAG08_01980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
AYM99268
LinkDB
All DBs
Position
454420..457581
Genome browser
AA seq
1053 aa
AA seq
DB search
MSITELSIKRPSFIMVIFIALTFLGIISYSRLNYELTPDMSMSMFSITTAYPGASPIEVE
TGITKKIEDAVSGIDNIDAIKSTSLDGMSSITVQLKVDADVEQAMQDAQRKVNEVVKDLP
SSAKPPAIGKFSMTDMPIMRFGVTARMNPTDLYALIKDEIKPAITKIKGTARVELVGGEE
RVIKVNINRSRADQYGVSLLQVNQAINNANLEFPTGKLTNNQSETSIKLKGKYQSIDDIK
NLIIKNDPTTGSKIRLSDIAAVQDGVKDITTFNRIDGKNSIGLQLIKQRDANSVEVARAV
KETLNEIESTYAKQELKFNIANDSSDFTIEAADLVMFDFFLAIVIVAAVMLLFLHSLRNS
LIVMISIPASLLSVFIAMNLLGYTINLLTLMAISLVIGILVDDSIVVLENIYRHLEKGKD
KVRASIDGRQEIGFTAVAITLVDVIVFLPLTMVGGIISNMLGQYSMVIVIATLMSLFVSF
TLTPLLASRWAKVEHLNTNSVFGKVLTVFENWLTRLTNFYGRMLAKALAKKRWVLGGSFA
LIIASFMLVGGGFIGGEFASNSDKGEVLINLELPQSATLQNTNETVKKVERLLFDKPEVV
KVYSSIGTSSGSMGSSRNTQNKAEINIKLVPNEERTQSSDLFAHYTKLELEKLLPGVKVN
SAIMNMMGTSNDAPISLVVSGNDPDKIYTAAVAIADKLKTIKGTSDVKLSVEKGTPELQV
AIDRDKMADLGLSMDVVGMSMNIAFSGNTDVKFSDKQKEYDVEIAYDKFDRKNEESLRNL
SFVNSMGQSVKLEQFADFNYGIASKQLDRKDRMPSVTITSQVLGVTPSVISSELDQFIQQ
AKFEKDINIDAEGEMKYMKETFSNLLLALVASILLVYLIMVMLYNSFVYPFVVFFSIPVS
IIGALLALALTMHTLNFFSLLGMIMLIGLVAKNGILIVDFANQLKANGKNTIEALILSGK
ARLRPILMTTLAMIFGMLPIALSSGAGAEWKNGLAWVLIGGLTSSMILTLFVVPSIYLLV
DLIKGEVKRKDVKPLIKAVNLDQPLVEMVEDIK
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgtcaataacagaactatccataaagcgaccgtcattcatcatggtcattttcatagca
ctgacatttttgggcataataagctattcaaggctgaattacgagcttaccccggatatg
tcaatgtcaatgttcagcatcacaacagcgtatccgggagcttcgcccattgaagtagaa
accggcatcaccaaaaaaatagaagatgcggtttcaggtatcgataatattgatgccatc
aaatctacttcactagatggcatgtcctccataactgtacagttgaaagttgatgcagat
gtggaacaagccatgcaggatgcacaaagaaaggtaaatgaagtggtcaaagatttgcct
tcaagtgccaagccaccggcgatcggcaaattttccatgaccgatatgcctatcatgcga
ttcggcgtgacagcaagaatgaacccgacagacctgtatgcattgataaaagatgagata
aagccggctattaccaaaattaaagggacagccagagtggaactggtaggtggcgaagaa
cgggttataaaagtgaatattaaccggagcagagccgatcaatacggtgtttctttactt
caggtgaaccaggcaatcaacaatgcgaacttggaatttccaacaggaaaactgaccaat
aatcaatcagagaccagcataaagcttaaaggcaaataccagtcaattgatgatatcaag
aatctgatcattaaaaacgatcccactaccggttccaaaataaggctttctgacattgcc
gctgttcaggatggtgtaaaagacattactacatttaatcggatagatggaaaaaactca
ataggacttcaattgattaaacagagggatgccaattctgtagaagtggcaagagccgta
aaggaaacattaaacgaaatagaaagcacttatgcaaagcaggaattaaaattcaatatt
gccaacgatagttccgattttactatagaagcggccgatttggtgatgttcgatttcttt
ttagccattgtaattgtagccgctgtgatgttgctattcctccatagtcttcgtaactca
ttgattgttatgatatctatacctgcatcacttctgtcagtgtttatagcgatgaatctg
ctgggctataccattaatcttttaaccttgatggctatttcccttgttataggaatactg
gttgatgatagtatagtggtacttgaaaacatctaccgccatcttgaaaaagggaaagac
aaggtacgagcttcgatagatgggaggcaggaaattggctttactgctgtcgctattacg
ctggtagatgtaatcgtttttctaccgctcactatggtaggcgggattatatccaatatg
ctgggacaatattcaatggttattgtcatcgccacattgatgagcttattcgtttctttc
acactcactcccttactggcttcacgctgggcaaaagttgaacacctcaacacgaattca
gtatttggaaaggtattaacggtatttgaaaattggcttacccggctaacaaatttctat
ggtcgtatgcttgctaaagctttggctaagaagcgatgggtattgggagggtcttttgca
ctgatcatcgcttccttcatgctggtaggcggtggatttattggaggggaattcgccagc
aacagcgacaaaggtgaagtgctgattaaccttgaactgcctcaaagcgcaacacttcaa
aatacgaatgaaaccgttaagaaagtagaaagattgctgtttgataaacctgaggtggta
aaagtatattcaagtatcggtaccagctccggctctatgggtagcagcaggaatacccaa
aacaaagcggagatcaatatcaagcttgtacccaacgaagaaagaactcaatcatccgac
ttgtttgcacactacaccaaattggaactggaaaagttgctgcccggtgtaaaggtaaac
tctgccattatgaatatgatgggaacctcaaacgatgcccctatttcattggtcgtgtcc
ggtaatgatcctgataagatttatacagcagccgtagctattgctgataaattgaaaaca
attaaaggaacatcggatgtaaaattatctgttgagaaaggaacgcctgaattgcaggta
gccattgacagggataaaatggcggatttgggtctgagtatggatgtcgtgggaatgtca
atgaacattgctttcagtggaaatacggatgtgaagtttagtgacaagcagaaggaatat
gacgttgaaattgcctatgacaaattcgacaggaagaacgaagaaagcctccgtaacctt
tcatttgtcaactcgatgggacaatccgtgaaattggagcagttcgctgattttaactat
ggaatagcttccaaacaattggataggaaagacagaatgccttctgttacgattacatca
caagtgctgggagttacaccaagcgttatcagcagtgaattggatcaattcatacaacag
gccaagtttgaaaaagatataaacattgacgccgaaggcgagatgaaatatatgaaggaa
acattttccaacctcttgctggcattagtagcttccatactgctagtgtacctgattatg
gtaatgctctataactcttttgtatatcctttcgtcgtgtttttttccattcctgtatcc
attataggtgcattactggcactggccttaaccatgcataccctcaatttcttttctcta
ttgggtatgattatgctgatagggttggttgccaaaaatgggatactgatcgtggatttt
gctaatcagttaaaagcaaatggaaagaataccattgaagcattaatcctaagcggaaaa
gcaagactccgtcccatattaatgaccacgcttgctatgatcttcgggatgcttcccatt
gccttatcatctggtgccggagcggaatggaagaatggtttagcatgggtgttgattggt
ggtttgaccagttcaatgatactcaccttgtttgttgtaccgtccatttatctccttgtc
gatttgataaaaggtgaagtaaaacgcaaagatgtaaaaccgttaatcaaagcagtgaat
ctggatcagccattggttgaaatggttgaagatattaagtaa
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