Chryseobacterium sp. 6424: CO230_05285 Help Entry CO230_05285       CDS       T05704                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism chrz  Chryseobacterium sp. 6424 Pathway chrz03030   DNA replication chrz03410   Base excision repair chrz03420   Nucleotide excision repair chrz03430   Mismatch repair Brite KEGG Orthology (KO) [BR:chrz00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     CO230_05285    03410 Base excision repair     CO230_05285    03420 Nucleotide excision repair     CO230_05285    03430 Mismatch repair     CO230_05285  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:chrz03032]     CO230_05285    03400 DNA repair and recombination proteins [BR:chrz03400]     CO230_05285 Enzymes [BR:chrz01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      CO230_05285 DNA replication proteins [BR:chrz03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      CO230_05285 DNA repair and recombination proteins [BR:chrz03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      CO230_05285    NER (nucleotide excision repair)     GGR (global genome repair) factors      CO230_05285    MMR (mismatch excision repair)     DNA ligase      CO230_05285   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       CO230_05285 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT DNA_ligase_ZBD PTCB-BRCT HHH 5_3_exonuc RNA_lig_T4_1 BRCT_2 Dna2 CdiI Auto_anti-p27 Motif Other DBs NCBI-ProteinID:  AYO57584 UniProt:  A0A3G2TBX2 LinkDB All DBs Position complement(1130389..1132392) Genome browser AA seq 667 aa AA seqDB search MSENIQQKIEALRQEIHQHNYSYYTLDEPTISDFEFDLKLKELQELELQFPEYYDSNSPT LRVGGQITKNFPTVQHQFRMYSLDNSYDFNDLEDWERRVQKTLNQPVEWVAELKFDGASI SILYENGKLKEAVTRGDGFQGDEITSNVKTIPEIPLQLHGQYPDRFFMRGEIYLTQKNFQ KINARRAEEGLDPFMNPRNTASGSLKMQDSAEVRRRGLSAVLYQYVGEQVPAATHWELLQ QARIWGFKISDQARLCRSMEEVQQFINYWEEHRHQLGFEIDGIVIKVNELAQQRALGYTA KSPRWAMAYKYKAEKAETVLLSVSYQVGRTGAVTPVANLTPVLLAGTVVKRASLHNEDII KKLGLHEHDHVYVEKGGEIIPKIVGVNLAKRNAENKEIEYIKNCPECGTPLQRIADQAIH FCPNELHCPPQVVGRMIHFVSRKALNIENLGSETIEQLYREKLVENPADFYALTKEQLLP LERMAEKSAQNIINGIEKSKEIPFEKVLYGIGIKHVGETVAKKLVKNFSSIDELRKATLE ELVQVEDIGGKIAESITAFFANPENILMTERLRSYGVQLEKQASQNETVSQILQNKTFLF TGKLSLFTRDDAEEMVEKHGGKNISAVSKNLNYLVVGEKAGSKLKKAQELGTVTILDEQQ FLDLIQK NT seq 2004 nt NT seq  +upstreamnt  +downstreamnt atgtccgagaatattcagcagaagatagaggccctgcgccaggaaattcatcagcacaac tacagttactatacgcttgatgaacccaccatttccgattttgaatttgaccttaaactt aaagaactacaggaactcgaattgcagttcccggaatattacgacagcaattcgcctacc ctgcgtgtgggtggccaaattaccaagaacttccctaccgtccagcatcagttccggatg tattccctagataattcctatgatttcaatgaccttgaggactgggaacggcgtgtacag aaaacgcttaaccaacccgtagaatgggtggctgaactgaagttcgacggtgcttctatc tcaatcctttacgaaaatggcaaacttaaggaagccgtaacgcggggcgacggtttccag ggtgatgagattacctcaaacgtaaagaccattcccgaaattccgctacagcttcatggc cagtatccggatcgcttctttatgcgcggcgaaatatatcttacccaaaaaaactttcag aaaatcaatgcccggcgtgcggaggaaggcctggatcctttcatgaatccacgaaatacc gcttccggcagtctgaaaatgcaggattcggctgaggtccggcggcgtggcttatccgcg gtactctatcaatacgtcggtgaacaggtgcctgcggccacacactgggaactgctgcag caagcccgcatctggggttttaaaatatctgaccaggccaggctttgccgtagtatggag gaagtacagcaattcatcaattattgggaagaacaccggcatcaactcgggttcgagatt gatggtatcgtaataaaagtgaatgaactcgcacaacagcgtgcccttggctataccgcc aaatcaccccgttgggccatggcttataaatacaaagcggaaaaggccgagacagtgctg ctcagcgtaagctatcaggtaggccggacgggcgcggtgacccctgtggccaatcttacg ccggtattattggccggcacggtggtaaaacgtgccagcctgcataatgaagacatcatc aagaagcttggcctgcatgagcacgaccacgtatatgtagagaaaggtggagagatcatc ccaaagattgtaggggtgaaccttgcaaaacgaaatgctgagaacaaggagattgagtat attaaaaactgcccggaatgcggcacgccgctacagcgcatcgcagaccaggccatacat ttctgcccgaacgagctgcactgtccgccacaggtcgtgggccgcatgatacactttgta tcgcgcaaagccctgaatatcgaaaatctgggcagtgagaccatcgagcagttataccgc gaaaaattggtggagaacccagctgatttttatgcactgacgaaagaacagctgctgcca ctggaacgtatggccgaaaagtccgcgcagaacatcatcaacggtattgaaaagtctaag gaaatcccttttgaaaaggtgctgtatggtatcggtatcaaacatgtgggcgaaaccgtc gcaaagaaactggtgaagaatttcagttccattgatgagctgagaaaagccacactggaa gaacttgtgcaggtagaagatattggtgggaagattgccgaaagcatcaccgcattcttt gcgaaccctgaaaacattctgatgaccgaacgcctgagaagctacggcgtacaactcgaa aagcaagccagccaaaacgagaccgttagccagatactgcaaaacaagacgttcctgttc accggcaaactttcattattcacgcgagatgatgcggaggaaatggtggaaaaacacggc ggcaagaatatttctgccgtttccaagaacctcaattatctcgtggtgggtgaaaaagcc ggcagcaaattaaaaaaggcgcaggaattgggcaccgtaaccattctggatgagcagcag tttcttgatctgatccagaaataa

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