Cytophaga hutchinsonii: CHU_3695
Help
Entry
CHU_3695 CDS
T00385
Symbol
nth
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
chu
Cytophaga hutchinsonii
Pathway
chu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
chu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CHU_3695 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chu03400
]
CHU_3695 (nth)
Enzymes [BR:
chu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CHU_3695 (nth)
DNA repair and recombination proteins [BR:
chu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CHU_3695 (nth)
Prokaryotic type
CHU_3695 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
DUF5986
Motif
Other DBs
NCBI-ProteinID:
ABG60928
UniProt:
A0A6N4SWQ3
LinkDB
All DBs
Position
complement(4268514..4269170)
Genome browser
AA seq
218 aa
AA seq
DB search
MQRKERFEKFLDYFSTHSPEPETELVYSNPYELLVAVSLSAQCTDKRVNLTTPALFNRYP
DAASLAKATSDEVFHYIRSISYPNNKAKHLVGMAQMLMKDFNGEVPDTVEDLVKLPGVGR
KTANVIASVIWQQPTMAVDTHVYRVSRRIGLVPQTATTPLAVEKQLMKYIPTALVHKAHH
WLILHGRYTCLARTPKCEVCPVTEICMWYSKNKKKLVN
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcaaagaacgatttgaaaaattcttagattatttctctacccattcacccgaa
ccagaaacagagctcgtatattcaaatccatacgagctcctggttgcggtgagtttaagt
gcccaatgtacagacaagcgtgtaaaccttacaacgcctgcactttttaaccgctacccc
gacgcagcttctttagccaaagccacttcagacgaagtgtttcattatatccgcagcatt
tcctatccgaacaataaagcaaaacacctggtaggtatggctcagatgttgatgaaagat
tttaatggtgaagtacctgataccgttgaagaccttgtaaaactgcctggtgtaggccgt
aaaacagctaatgtcattgccagtgttatctggcagcagcctaccatggctgttgacaca
catgtataccgtgtttcacgcaggataggcctggtgcctcaaacagcaaccacaccgctg
gcggtagaaaaacagctcatgaaatacatccctactgcgctcgtacacaaagcacatcac
tggttaatactacacgggcgctacacatgtctggcacgtacacccaaatgtgaggtctgc
cctgttacagagatctgcatgtggtattcgaaaaataaaaagaaacttgtaaactaa
DBGET
integrated database retrieval system
