KEGG   Capra hircus (goat): 100861041
Entry
100861041         CDS       T02910                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30 isoform X1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
chx  Capra hircus (goat)
Pathway
chx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:chx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100861041 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:chx03041]
    100861041 (SMNDC1)
Spliceosome [BR:chx03041]
 Complex A
  U2 snRNP components
   U2 related factors
    100861041 (SMNDC1)
 Complex B
    100861041 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    100861041 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR
Other DBs
NCBI-GeneID: 100861041
NCBI-ProteinID: XP_017896832
UniProt: A0A452E4K2
LinkDB
Position
26:21115500..21126950
AA seq 199 aa
MEVIELTKDLLSTQPSETLASSDNFASTQPTHSWKVGDKCMAIWSEDGQCYEAEIEEIDE
ENGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALK
KAQRIKELEQEREDQKVKWQQFNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADK
PMTQYQDTSKYNVRHLMPQ
NT seq 600 nt   +upstreamnt  +downstreamnt
atggaggttattgaactaaccaaagatcttctgtcaactcagccttctgaaactctggca
agttcagacaactttgcttctactcagcccactcattcatggaaagtaggagacaagtgt
atggcaatctggagtgaagatggacagtgttatgaagcggagattgaggagatagatgaa
gaaaacggcaccgctgcaatcacttttgctggctatggcaatgctgaagtgactccacta
ttgaacctcaagcctgtagaagaaggaaggaaggcaaaggaggacagtggcaacaaaccc
atgtcaaaaaaagaaatgattgcccagcagcgtgaatataaaaagaagaaagctttgaaa
aaggcacagagaataaaagaacttgaacaagaaagagaggaccagaaggtaaaatggcaa
cagttcaacaacagagcctattctaaaaacaaaaaaggccaggtaaagaggagtattttt
gcttcacctgagagtgtaactggcaaagttggagtaggaacttgtggaattgctgataaa
cctatgacacagtatcaagatacctctaaatacaatgttaggcatttgatgcctcaataa

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