Capra hircus (goat): 102168257
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Entry
102168257 CDS
T02910
Symbol
C8H9orf72
Name
(RefSeq) protein C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
chx
Capra hircus (goat)
Pathway
chx04140
Autophagy - animal
chx05014
Amyotrophic lateral sclerosis
chx05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102168257 (C8H9orf72)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102168257 (C8H9orf72)
05022 Pathways of neurodegeneration - multiple diseases
102168257 (C8H9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
chx04131
]
102168257 (C8H9orf72)
Membrane trafficking [BR:
chx04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
102168257 (C8H9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
102168257
NCBI-ProteinID:
XP_017907374
UniProt:
A0A452EMG0
LinkDB
All DBs
Position
8:16647899..16674102
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AA seq
481 aa
AA seq
DB search
MSTLCPPPSPAVAKTEIALSGESPLLAATFAYWDNILGPRVRHIWAPKTEQVLLSDGEIT
FLANHTLNGEILRNAESGAIDVKFFVLSEKGVIIVSLIFDGNWNGDRSTYGLSIILPQTE
LSFYLPLHRVCVDRLTHIIRKGRIWMHKERQENVQKIVLEGTERMEDQGQSIIPMLTGEV
IPVMELLSSMKSHSVPEEIDIADTVLNDDDIGDSCHEGFLLNAISSHLQTCGCSVVVGSS
AEKVNKIVRTLCLFLTPAERKCSRLCEAESSFKYESGLFVQGLLKDSTGSFVLPFRQVMY
APYPTTHIDVDVNTVKQMPPCHEHIYNQRRYMRSELAAFWRATSEEDVAQDTFIYTDESF
TPDLNIFQDVLHRDTLVKAFLDQVFHLKPGLSLRSTFLAQFLLVLHRKALTLIKYIEDDT
QKGKKPFKSLRNLKIDLDLTAEGDLNIIMALAEKIKPGLHSFIFGRPFYTSVQERDVLMT
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccctctgtccaccaccatctccagctgttgcaaagacagagattgctttaagt
ggtgaatcccctttattagcagcgaccttcgcttactgggacaatattcttggtcccaga
gtaaggcacatctgggctccaaagacagaacaggtacttctcagcgatggagaaataact
tttcttgccaaccataccctcaacggagaaatccttcgaaatgcagagagtggggcaata
gacgtgaagttctttgtcttatctgagaaaggagtaattattgtttcgttaatcttcgac
ggaaactggaatggggatagaagcacctatggactatcgattatacttccccagacagag
ctgagcttctacctcccacttcacagagtgtgtgtggatagattaactcacattatccgg
aaagggaggatatggatgcataaggagaggcaagaaaatgtccagaaaatcgtcttggaa
ggcacagagagaatggaagaccagggtcagagtattattccaatgcttactggagaagtc
attcctgtaatggaattgctttcatctatgaaatcgcacagtgttcctgaagaaatcgat
atagctgatacagttctcaatgatgatgatattggtgacagttgccatgaaggctttctt
ctcaatgctatcagctcacacttgcaaacttgtggctgctctgttgtagtaggtagcagt
gcagagaaagtaaataagatagtaagaacattatgcctttttctgactccagcagagaga
aaatgctccagattgtgtgaagcagaatcatcgtttaaatacgagtcagggctctttgta
caaggcctactaaaggattcaacgggaagctttgtacttcccttccggcaagtcatgtat
gcaccctaccccaccacacacatagacgtggacgtcaataccgtcaagcagatgccaccc
tgtcacgagcatatttataatcagcgtcggtacatgcgatcagagctggcagcgttctgg
cgagccacttcagaggaggacgtagctcaggacaccttcatctacacagatgagagcttt
actcccgacttgaacatttttcaagatgtcttacatagagacactcttgtgaaagccttc
ctggatcaggtctttcatttgaaacccggtctgtctctcaggagtactttccttgcacag
tttctgctcgtccttcacagaaaagccttgacgctaataaaatatatagaagatgatacg
cagaaggggaaaaagccctttaaatcgcttcggaacctgaagatagaccttgatttaaca
gcagagggcgatcttaacataataatggctctggctgagaaaatcaagccaggcctccac
tcctttatctttggaagacctttctataccagtgtccaagaacgagatgttctaatgacg
ttttaa
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