Capra hircus (goat): 102169501
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Entry
102169501 CDS
T02910
Symbol
DHX9
Name
(RefSeq) ATP-dependent RNA helicase A isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
chx03041
]
102169501 (DHX9)
03012 Translation factors [BR:
chx03012
]
102169501 (DHX9)
Enzymes [BR:
chx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
102169501 (DHX9)
5.6.2.6 RNA 3'-5' helicase
102169501 (DHX9)
Spliceosome [BR:
chx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102169501 (DHX9)
Translation factors [BR:
chx03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
102169501 (DHX9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
Dicer_dimer
ResIII
AAA_19
AAA_22
nSTAND3
AAA_14
ATPase
XRN1_D1
Motif
Other DBs
NCBI-GeneID:
102169501
NCBI-ProteinID:
XP_005691009
LinkDB
All DBs
Position
16:62524255..62569488
Genome browser
AA seq
1287 aa
AA seq
DB search
MGDVKNFLYAWCGKRKMTPAYEIRAVGNKNRQKFMCEVRVEGYNYTGMGNSTNKKDAQSN
AARDFVNYLVRINELKSEEVPAIGVAPPPPSATDSSDTTTDDGGLPGNLGGPLPPHLTLQ
AENNSGGGGSGYVPTWDRGANLKDYYSRKEEQEVQATLESEEVDLNAGLHGNWTLENAKA
RLNQYFQKEKIQGEYKYTQVGPDHNRSFIAEMTIYIKQIGRRIFAREHGSNKKLAAQSCA
LSLVRQLYHLGVIEPYSGLTKKKEGETVEPYKVNLSQDLEHQLQNIVQELNLEIVPLPED
PSVPVALNLGKLAQFEPSQRQNPVGVVPWSPPQSNWNPWTSSNIDEGPLAYATPEQISMD
LKNELMYQLEQDRDLQAVLQERELLPVKKFESEILEAISQNPVVIIRGATGCGKTTQVPQ
FILDDCIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPH
ASIMFCTVGVLLRKLEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMS
ATIDTSMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQMTHFVPPPKDKKKKDKDDDGGED
DDANCNLICGDEYGAETRISMAQLNEKETPFELIEALLLYIETLNVPGAVLVFLPGWNLI
YTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITIN
DVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFE
RLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALD
ANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTISAATCFPEPFISEGKRLGYI
HRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEI
LINSGFPEECLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGRNALIH
KSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFASKKVMSDGQLVV
VDDWIRLQISHEAAACITALRAAMEALVVEVTKQPGIISQLDPVNERMLNTIRQISRPSA
AGINLMIGTTRYGDGPRPPKMARYDNGSGYRRGGSSYSGGGYGLGGYGTGGYGGGGGYGG
RGGYSGGGYGGGSNSFRGSYVGGGGGGGGGGGGFRGLSRGGYRGMSGGDYRGESGGGYRG
SGGFQRGGGRGGYGGGYFGQGRGGGGY
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatgttaaaaatttcctgtatgcctggtgtggcaaaaggaagatgaccccagca
tatgaaatcagagcagtggggaacaaaaacagacagaaattcatgtgtgaggttcgagtg
gaaggatataattacactggcatgggtaattccaccaataaaaaagatgcacagagcaat
gctgccagagactttgttaactatttggttcgaataaatgaactaaagagtgaagaagtc
ccagctattggggtagcaccccctccaccctcagctactgattcatctgataccacaaca
gatgatggaggtttaccaggaaacctgggaggacctcttcctccacatctgactctccag
gcagaaaataattctggaggtgggggctctggctatgtgcccacctgggatcgaggtgcc
aacttgaaggattattactcaagaaaagaagaacaggaagtccaagcgacccttgaatct
gaagaagtggatttaaatgctggacttcatggaaactggaccttggaaaatgctaaggct
cgtctgaaccagtatttccaaaaagaaaagattcaaggagaatataagtacacccaagtg
ggtcctgatcacaacaggagctttattgcagaaatgaccatttatatcaagcagataggc
agaaggatttttgcacgcgaacatggatcaaataaaaaattggcagcacagtcctgtgcg
ctgtcacttgtcagacaactctaccaccttggagtgattgaaccttactctggacttaca
aagaagaaagaaggagagacagtggagccttacaaagtgaatctttctcaagatctggag
catcagctgcagaacattgttcaagagttaaatcttgagatcgtgcccctacctgaagat
ccctctgtgcctgttgcactcaaccttggcaaactggctcagtttgagccatcccagcgg
caaaacccagtgggtgtggttccttggtcaccgccacaatccaactggaatccttggact
agcagcaacattgatgaggggcctctggcttatgctactcctgaacaaattagcatggac
ctcaagaatgaattaatgtatcagctggaacaggatcgtgatttgcaagcagtcttacag
gagagagagttactgcctgtgaagaaatttgaaagtgaaatcctggaagcaattagtcag
aacccagttgtcattattcgaggtgctaccggatgtggtaaaaccacacaggttccccag
tttattctagatgactgcatccagaatgaccgcgcagctgagtgcaacattgtagtaact
cagcccaggagaatcagtgcggtttctgtggcagaacgagttgcatatgagagaggagaa
gagcctggaaaaagctgtggctatagcgttcggtttgagtccatacttcctcgccctcat
gcgagtataatgttttgcactgtaggtgtgctcctaagaaaattagaagccggcattcga
ggaatcagtcatgtaattgtagatgaaatacatgagagagacataaatactgacttcctt
ttggtagtgctgcgtgatgtcgttcaggcttatcccgaagttcgcattgttctcatgtct
gctactattgatactagcatgttctgtgaatatttcttcaattgcccaatcattgaagtt
tatgggaggactttcccagttcaagaatactttttggaagattgtattcagatgacccac
tttgttcctccaccaaaggacaagaagaagaaggataaggatgatgatggtggtgaggat
gatgatgcaaattgcaacctgatctgtggtgatgaatatggtgcagaaacaaggataagc
atggctcaactgaatgaaaaggaaactccttttgaactcattgaagctctacttctgtac
attgagacccttaatgttcctggagcggtgttggtctttctgcctggctggaatttgatt
tatactatgcagaagcatttggaaatgaatccacattttggaagccaccggtatcagatt
ctacctctgcattctcagattccgcgagaggagcagcgcaaagtatttgatccagtacca
agtggagtaaccaagattattttgtccacaaatattgctgagacaagcatcaccataaat
gatgttgtttatgtcattgactcctgcaagcaaaaggtgaagctgttcactgctcacaac
aatatgaccaattatgctacagtatgggcatctaaaacaaaccttgagcagcggaaagga
cgagctggccgtgtacgccctggattctgctttcacctctgtagccgagctcgttttgag
agactcgaaacccacatgacaccagagatgttccgaacaccactgcatgaaattgctttg
agcataaaacttctgcgtctgggaggaattggccagtttctggccaaggcaattgaacct
ccacctttggatgctgtgattgaagcagagcacacgcttagagagcttgatgcattagat
gccaatgatgagttgactcctctaggacgaatcctggctaaactccccattgagcctcgt
tttggcaaaatgatgataatgggatgtattttctatgtgggagacgctatttgcaccatc
tctgcggccacctgctttccagagccgttcatcagtgaagggaagcgactgggttatatc
catcgaaattttgctggaaaccgattttctgatcatgtggcccttttatcagtattccag
gcttgggatgatgctagaatgggtggagaagaagcagagatacgtttttgtgagcacaaa
agactcaatatggcaacactaagaatgacctgggaagccaaagttcagctcaaagagatt
ctcattaattctggatttccagaagagtgtttactgacacaagtgtttactaacactgga
ccagacaataatctggatgttgttatctctctcctggcctttggtgtgtaccccaatgtg
tgttaccataaggaaaagagaaagattctcaccactgaagggcgtaatgcacttatccac
aagtcatctgttaattgtccttttagcagccaagacatgaagtacccatctcccttcttt
gtatttggtgaaaagattcgaactcgggccatctctgctaaaggcatgaccttagtcacc
cccttgcagctgctgctttttgcctccaagaaagttatgtctgatggacagcttgtggtt
gtagacgactggataagactgcaaatatctcatgaagctgctgcctgtatcactgctctt
cgagcagccatggaggctctggttgttgaagtaaccaaacagcctggtatcatcagccag
ttggatcctgttaatgaacgtatgctgaacacaatccgccagatctctcggccctcagct
gctggtatcaaccttatgattggcactacacggtatggagatggtccccgtcctcccaag
atggctcgttatgacaatggaagtggatatagaaggggcggttctagctacagcggtggg
ggctatggccttggaggctatggcactggaggctacggaggtggtggaggctatggtggt
agaggaggctacagtggcggtggctatgggggtggctccaattcgtttcggggaagctat
gttggaggtggtggcggcggcggtggtggcggtggtggttttagagggctttcccgaggt
ggctatagaggtatgtcaggaggagactacagaggggagagtggaggagggtaccgagga
tctggaggattccagcgaggaggtggcagagggggttatgggggtggttacttcggacaa
ggaagaggaggtggaggctattaa
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