Capra hircus (goat): 102177748
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Entry
102177748 CDS
T02910
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
chx04040
]
102177748 (SCN4A)
Ion channels [BR:
chx04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102177748 (SCN4A)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
102177748
NCBI-ProteinID:
XP_005694057
LinkDB
All DBs
Position
19:complement(47757103..47809399)
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AA seq
1822 aa
AA seq
DB search
MANASLPTVVPLGPESLRPFTRESLAAIERRVLEEEARQLRNKQMEIEDTERKPRSDMEA
GKNLPLIYGDPPPEVIGIPLEDLDPYYSDKKTFIVLNKGKSIFRFSATPALYLLSPFSIV
RRCAIKVLIHSLFSMFIMITILTNCVFMTMSDPPSWSKHVEYTFTGIYTFESLIKILARG
FCIDDFTFLRDPWNWLDFSVIMMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPFNDTNTTWYGNDTW
YSNDTWDGQESWASNSTFDWDAYINDEGNFYFLEGSNDALLCGNSSDAGHCPEGYECIKA
GRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFVVIIFLGSFYL
INLILAVVAMAYAEQNEATLAEDQEKEEEFQQMLEKFKKQQEELEKAKAAQALEGGEVDG
DPAHGKDCNGSLDTSAGEKGPPRPSCGTDSGISDAMEELEEAHQKCPPWWYKCSHKVLIW
NCCTPWVKFKKIVHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEQFDSVLNVGNLVFT
GIFTAEMVLKLIAMDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFK
LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIAADCS
LPRWHMHDFFHSFLIVFRILCGEWIETMWDCMEVAGQAMCLTVFLMVMVIGNLVVLNLFL
ALLLSSFSADSLAASDEDGEMNNLQIAIARIKWGIGFAKAFLVGLLHGKVLSPKVIMLSL
GSIGEAGEAGEAPESAPEDEKKEPPPEEDGKDLKKDHHILNHMGLADGPPPSIELDHLNF
INNPYLTIHVPIASEESDLEMPTEEETDTFSEPEDVKKPLQPLDGNSSVCSTADYKPPED
DPEEQAEENPEGEQPEECFTEACVQRFPFLYVDISQGRGKKWWTLRRACFKIVEHNWFET
FIVFMILLSSGALAFEDIHIEQRRVIRTILEYADKVFTYIFILEMLLKWVAYGFKVYFTN
AWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVNALLG
AIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSVRFDISEVNNKSECESLMHT
GQVRWLNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREKEEQPQYEVNLYMYLYF
VIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLGSKKPQKPI
PRPQNKVQGMVYDLVTKQAFDITIMILICLNMVTMMVETDDQSQLKVDILYNINMVFIII
FTGECVLKMLALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARI
GRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKKESGIDD
MFNFETFGNSIICLFEITTSAGWDGLLNPILNSGPPDCDPNLENPGTSIRGDCGNPSIGI
CFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLGEDDFEMFYETWEKFDPDATQFI
DYSRLSDFVDTLQEPLRIAKPNKIKLITLDLPMVPGDKIHCLDILFALTKEVLGDSGEMD
ALKETMEEKFMAANPSKVSYEPITTTLKRKHEEVCAIKIQRAYRRHLLQRSVKQASYMYR
HNHDGGGDGAPEKEGLIADTMSKMYGPNNGNSGVLSKEEERGSTGAPGPAVGLRPISPSE
TPLPPAPPLGQTVRPGVKESLV
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgcgtctctgcccacggtggtgcctctgggccccgagagcctacgccccttc
acccgggagtccctggcagccatagagcgccgggtgttggaggaggaggcccggcagttg
cggaacaagcagatggagatcgaggataccgagcggaagccacgcagcgacatggaggct
ggcaagaacctgccgctcatctacggggaccccccgccggaggtcatcggcatccccctg
gaggatctggatccctactacagcgacaagaagaccttcatcgtgctcaacaagggcaag
tccatcttccgcttctcagccactcctgctctctacctcctgagccccttcagcatcgtc
agacgctgcgccatcaaggtgctcatccactcgctgttcagcatgttcattatgatcacc
atcctgaccaactgcgtgttcatgaccatgagtgacccgccttcctggtccaagcacgtg
gagtataccttcacagggatctacaccttcgagtccctcatcaagatcctggcccgaggc
ttctgcatcgatgacttcacattcctccgggatccctggaactggctggacttcagcgtc
atcatgatggcgtacctgacggaatttgtggacttgggcaacatctcagcgctgagaacc
ttccgggtgctgcgggccctgaaaaccatcacggtcatcccagggctgaagaccatcgtg
ggggccctgatccagtcggtaaaaaaactctcggacgtgatgatcctcaccgtcttctgc
ctgagcgtctttgccctggtggggctgcagctcttcatgggaaacctgcggcagaagtgt
gtgcgctggcccccgcccttcaatgacaccaacaccacgtggtacggcaacgatacctgg
tacagcaacgacacctgggacggccaggagagctgggccagcaactctacctttgactgg
gatgcctacatcaatgatgaagggaacttctatttcctggagggctccaacgacgccctg
ctctgtgggaacagcagcgatgctgggcattgccctgagggttatgagtgcatcaaggcc
gggcggaaccccaactacggctacaccagctatgacaccttcagctgggccttcctggct
ctcttccgcctcatgacccaggactattgggagaacctcttccagctgacccttcgagca
gccggcaagacctacatgatctttttcgtggtcatcattttcctgggctccttctacctc
atcaacctgatcctggctgtggtagccatggcctacgctgagcagaacgaggccaccctg
gccgaggatcaggagaaagaagaggagtttcagcagatgctggagaaattcaaaaaacag
caggaggagctggagaaggccaaggctgcccaggctctggaaggtggggaggtggacggg
gacccagcacacggcaaagactgcaacggcagcctggacacatcagcaggggagaagggg
cctccgaggccaagctgcggcacagacagcggtatttctgatgccatggaagagctggaa
gaggcccaccagaaatgcccaccatggtggtacaaatgttcccataaagtgctcatatgg
aactgctgcaccccgtgggtgaagttcaagaagatcgtccacctgattgtcatggacccc
tttgtggacctgggcatcaccatctgcatcgtgctcaacaccctcttcatggccatggag
cattacccgatgacagaacagtttgacagcgtgctcaacgtgggcaacctggtcttcaca
ggcatcttcacagccgagatggtgctgaagctcattgccatggacccctacgagtacttc
cagcagggctggaacatcttcgacagtatcatcgtcaccctcagcctggtggagctgggc
ctggccaacgtgcaggggctatcggtgctccgctccttccgtctgctgagggtcttcaag
ctggccaagtcatggccgacgctgaacatgcttatcaagatcatcggcaactcggtgggg
gcgctgggcaacctgacgctggtgctggccatcatcgtgttcatcttcgccgtggtgggc
atgcagctgtttggcaagagctacaaggagtgcgtgtgcaagatcgccgcggactgcagc
ctgccccgctggcacatgcacgacttcttccactcctttctcatcgtcttccgcatcctg
tgcggggagtggatcgagaccatgtgggactgcatggaggtggccggccaggccatgtgc
ctcaccgtcttcctcatggtcatggtcatcggcaacctggtggtcttgaacctgttcttg
gccctgctgctcagctccttcagtgccgacagcctggcagcctcggacgaggatggcgag
atgaacaacctgcagattgccatcgctcgcatcaagtggggcatcgggttcgccaaagcc
ttcctcgtggggctgctgcatggcaaggtcctgagccccaaggttatcatgctcagcctc
ggaagcatcggcgaggctggggaggccggcgaggctccggaaagtgcccctgaggatgag
aagaaggagcctccgcccgaggaggatggcaaggacctcaaaaaggaccaccatatcctg
aaccacatgggcctggctgacggccctccccccagcatcgagttggaccacctcaacttc
attaacaacccctacctgaccatccatgtgcccatcgcctccgaggagtctgacctggag
atgcccacagaggaggaaactgacaccttctccgagcctgaggatgtcaagaagccgctg
cagcccctggatgggaactcctccgtctgcagcactgccgactacaagccccctgaggac
gaccccgaggagcaggccgaggagaaccccgagggagagcagcctgaggagtgcttcacc
gaagcctgcgtgcagcgctttcccttcctctacgtggacatctcccagggtcgagggaag
aagtggtggaccctccgcagggcctgcttcaagatcgtcgagcacaactggttcgagacc
ttcattgtcttcatgatcctgcttagcagtggggccttggccttcgaggacatccacatc
gagcagcggcgagtcatccgcaccatcctggagtatgccgacaaggtcttcacctacatc
ttcatcctggagatgctactcaagtgggtggcctacggcttcaaggtgtacttcaccaat
gcctggtgctggctcgacttcctcattgtggacgtctccatcatcagcctggtggccaac
tggctgggctactcggagctgggacccatcaaatccctgcggacactgcgggccctgcgc
cccctgagggcactgtctcgattcgagggcatgagggtggtggtgaatgccctcctggga
gccatcccctccatcatgaacgtgctgctcgtctgcctcatcttctggctcatcttcagc
atcatgggcgtcaacctgtttgctggcaagttctactactgcatcaacaccaccacctcc
gtgagattcgacatctccgaggtcaacaacaagtccgagtgcgagagcctgatgcacacg
ggccaggtccgctggctcaacgtcaaggtcaactacgacaacgtgggtctgggctatctc
tcgctcttgcaggtggccaccttcaagggctggatggacatcatgtatgctgccgtggac
tcccgggagaaggaagagcagccgcagtacgaggtgaacctctacatgtacctgtatttc
gtcatcttcatcatcttcggctccttcttcaccctcaacctcttcattggcgtcatcatc
gacaacttcaaccagcagaagaagaagtttggagggaaagacatcttcatgacagaggaa
cagaagaagtactataacgccatgaagaagcttggttccaagaagcctcagaagccaatt
ccccggccccagaacaaggtccagggcatggtgtacgacctggtgaccaagcaggcgttt
gacatcacgatcatgatcctcatttgcctcaacatggtcaccatgatggtggagacggac
gaccagagccagctcaaggtggacatcctgtacaacatcaacatggtcttcatcatcatc
ttcacgggcgagtgcgtgctcaagatgctggccctgcgccagtactacttcaccgtcggc
tggaatatcttcgacttcgtggttgtcatcctgtccattgtgggcctggcgctctccgac
ctgatccagaaatacttcgtatcacccacgctgttccgtgtgatccgcctggcgcggatc
gggcgggtcctgcggctgatccgcggggccaagggcatccggacgctgctcttcgcgctc
atgatgtcgctgcccgccctcttcaacatcggcctcctcctcttcctggtcatgttcatc
tactccatcttcggcatgtccaacttcgcctacgtcaagaaggagtctggcatcgacgac
atgtttaacttcgagaccttcggcaacagcatcatctgcctcttcgagatcaccacgtcg
gccggctgggatgggctcctcaaccccatcctcaacagcgggccccccgactgtgacccc
aacctggagaacccgggcaccagcatccggggcgactgcggcaacccctccatcggcatc
tgcttcttctgcagctacatcatcatttccttcctcatcgtggtcaacatgtacattgcc
atcatcctggagaacttcaacgtggccacggaggagagcagcgagcctctcggggaggac
gacttcgagatgttctacgagacgtgggagaagttcgaccccgacgccacgcagttcatc
gactacagccgcctctccgacttcgtggacaccctgcaggagccgctgaggatcgccaag
cccaacaagatcaagctcatcacgctggatctgcccatggttccgggggacaagatccac
tgcctggacatcctctttgccctgaccaaggaggttctaggcgactctggggagatggac
gccctcaaggagaccatggaggagaagttcatggctgccaacccctccaaggtctcctac
gagcccatcaccaccaccctcaagaggaagcacgaggaagtgtgcgccatcaagatccag
agggcctaccgccggcatctgctgcagcgctccgtgaagcaggcctcctacatgtaccgc
cacaaccatgacggcggcggggacggggcccccgagaaggaggggctgatcgccgacacc
atgagcaagatgtacggccccaacaacgggaacagcggtgtgctgagcaaagaggaggag
aggggctccacgggggcccccggacctgctgtggggctcaggcccatcagcccctccgaa
acacccctccctccagccccacccctggggcagacggtgcgccccggggtcaaagagtct
ctcgtctag
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