Capra hircus (goat): 102179357
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Entry
102179357 CDS
T02910
Symbol
SPTBN2
Name
(RefSeq) spectrin beta chain, non-erythrocytic 2 isoform X1
KO
K23932
spectrin beta, non-erythrocytic 2
Organism
chx
Capra hircus (goat)
Pathway
chx04517
IgSF CAM signaling
chx04820
Cytoskeleton in muscle cells
chx05017
Spinocerebellar ataxia
chx05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102179357 (SPTBN2)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102179357 (SPTBN2)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
102179357 (SPTBN2)
05022 Pathways of neurodegeneration - multiple diseases
102179357 (SPTBN2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
chx04812
]
102179357 (SPTBN2)
Cytoskeleton proteins [BR:
chx04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102179357 (SPTBN2)
Intermediate filaments
Intermediate filament-binding proteins
102179357 (SPTBN2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
sll0997_C
Motif
Other DBs
NCBI-GeneID:
102179357
NCBI-ProteinID:
XP_017898573
LinkDB
All DBs
Position
29:complement(45099488..45140461)
Genome browser
AA seq
2385 aa
AA seq
DB search
MSSTLSPTDFDSLEIQGQYSDINNRWDLPDSDWDNDSSSARLFERSRIKALADEREAVQK
KTFTKWVNSHLARVTCRVGDLYSDLRDGRNLLRLLEVLSGETLPKPTKGRMRIHCLENVD
KALQFLKEQKVHLENMGSHDIVDGNHRLTLGLVWTIILRFQIQDISVETEDNKEKKSAKD
ALLLWCQMKTAGYPNVNVHNFTTSWRDGLAFNAIVHKHRPDLLDFESLKKCNAHYNLQNA
FNLAEKELGLTKLLDPEDVNVDQPDEKSIITYVATYYHYFSKMKALAVEGKRIGKVLDHA
MEAERLVEKYESLASELLQWIEQTIVTLNDRQLANSLSGVQNQLQSFNSYRTVEKPPKFT
EKGNLEVLLFTIQSKLRANNQKVYTPREGRLISDINKAWERLEKAEHERELALRTELIRQ
EKLEQLAARFDRKAAMRETWLSENQRLVSQDNFGLELAAVEAAVRKHEAIETDIVAYSGR
VQAVDAVAAELAAEHYHDIKRIAARQHNVARLWDFLRQMVAARRERLLLNLELQKVFQDL
LYLMDWMEEMKGRLQSQDLGKHLTGVEDLLQLHELVEADIAVQAERVRAVSASALRFCDP
GKEYKPCDPQLVSERVATLEKSYESLCELAAARRARLEESRRLWRFLWEVGEAEAWVREQ
QHLLASAETGRDLTGVLRLLNKHTALRGEMSGRLGPLKLTLEQGQQLVAEGHPGAGQAAA
RTAELQAQWERLEALAEERAQRLAQAASLYQFQADANDMEAWLVDALRLVSSPELGHDEF
STQALARQHRALEEEIRGHRPTLDALREQAAALPPTLSRAPEVQGRVPTLQRHYEELRAR
AGERARALEAALALYTMLSEAGACGLWVEEKEQWLNGLALPERLEDLEVVQQRFETLEPE
MNALAARITAVNDIAEQLLKANPPGKDSIVNTQKQLNHRWQQFRSLADGKKAALTSALSI
QNYHLECTETQAWMREKTKVIESTQGLGNDLAGVLALQRKLAGTERDLEAIAARVGELTR
EANALAAGHPAQAPAINARLGEVQAGWEDLRATMRRREESLGEARRLQDFLRSLDDFQAW
LGRTQTSVASEEGPATLPEAEALLAQHAALRGEVERARSEYSRLRAVGEEVTRDQADPQC
LFLRQRLEALGTGWEELGRMWESRQGRLAQAHGFQGFLRDARQAEGVLSSQEYVLSHTEM
PGTLQAADATIKKLEDFMSTMDANGERIRGLLEAGRQLVSEGNVHAEKIQEKADSVERRH
KKNQEAVQQLLGRLRDNREQQHFLQDCHELKLWIDEKMLTAQDVSYDEARNLHTKWQKHQ
AFMAELAANKDWLDKVDKEGRELTLEKPELKALVWEKLEDLHRRWDELETTTQAKARSLF
DANRAELFAQSCSALESWLESLQAQLHSDDYGKDLTSVNILLKKQQMLEREMAVREKEVE
AIQAQAKALAQEDQGAGEVERTSRAVEEKFRALCQPMEERCRRLQASREQHQFHRDVEDE
ILWVTERLPMASSMEHGKDLPSVQLLMKKNQTLQKEIQGHEPRIADLTERQRTLGAAAAG
PELAELQEMWKRLGHELELRGKRLEEALRAQQFYRDAAEAEAWMGEQELHMMGQEKAKDE
LSAQAEVKKHQVLEQALADYAQTIHQLAASSQDMIDHEHPESTRLSIRQAQVDKLYAGLK
ELAGERRERLQEHLRLCQLRRELDDLEQWIQEREVVAASHELGQDYEHVTMLRDKFREFS
RDTSTIGQERVDGANALANGLIAGGHAARATVAEWKDSLNEAWADLLELLDTRGQVLAAA
HELQRFLHGARQALARVQHKQQQLPDGTGRDLNAAEALQRRHCAFEHDIQALSAQVQQVQ
DDGHRLQKAYAGDKAEEIGRHMQAVAEAWAQLQGSSAARRQLLLDTTDKFRFFKAVRELM
LWMDGVNLQMDAQERPRDVSSADLVIKNHQGIKAEIEARADRFSSCVDMGQGLLARSHYA
AEEISEKLSQLQARRQETADKWQEKMDWLQLVLEVLVFGRDAGVAEAWLCSQEPLVRSAE
LGCTVDEVESLIKRHEAFQKSAVAWEERFSALEKLTALEEQEKERKRKREEEERRKLPPP
PEPPASPPEGHLVDSHTAPAAPRDGAHPRLPASVNGICTDAEGPQPLIEQQRLEQGGLPE
GPGSGAGDEANGPRGEKQARTRGPTPPIMPQSRSSESARVATLPTRGPELSAQEQMEGLL
CRKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSLARAQGSV
AFDYRKRKHVFKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAIATASSASGEPEEPAVPSA
TRGMTRAMTMPPVSPAGAEGPVVLRSKDGREREREKRFSFFKKNK
NT seq
7158 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaccctgtcgcccacagactttgacagcttggagatccagggccagtacagt
gacatcaacaaccgctgggacctgcccgactcggactgggacaatgacagcagctcggcc
cgcctctttgagaggtcccgaattaaggccctggcagatgagcgagaagctgtgcagaag
aaaaccttcaccaagtgggtcaactcacacctggcccgggtgacgtgccgggtgggagac
ctgtacagtgacctccgggatggacggaacctcctgaggctcctcgaggtgctctcaggg
gagacactgccaaagcccacgaagggccgcatgcggatccactgcctggagaatgtggac
aaggcgctgcagttcctgaaggagcaaaaagtgcacttggaaaacatgggctcgcatgac
atcgtggacgggaaccaccgcctgaccctcgggctggtgtggaccatcatccttcgattc
cagatccaagacataagtgtggaaacagaagacaacaaggagaagaagtcagccaaggat
gccttgctactctggtgccagatgaagaccgccgggtaccccaatgtcaacgtgcacaac
ttcaccaccagctggagagatgggctggccttcaacgccattgtacataaacaccggcca
gacctgctggattttgagtccctgaagaagtgtaatgcacactacaatctgcagaatgcc
ttcaatctggctgagaaggagctgggacttacaaagctgctggatcctgaagatgtgaat
gtggaccaaccagatgagaaatcaattattacctatgtggctacttactaccactacttc
tccaagatgaaagccctggctgtggaaggcaaaagaattgggaaggtgctagaccacgcc
atggaggcagagcgcctggtggagaagtatgaatccctggcctccgagctgctccagtgg
atcgagcagaccatcgtgaccctcaatgaccggcagctggccaactccctgagcggagtc
cagaaccagctccagtccttcaattcctaccgcaccgtggagaagccacccaagttcact
gagaaagggaacttggaagtgctgctcttcaccatccagagcaagctgcgggccaacaac
cagaaggtctacacgccccgtgagggccggctcatctccgacatcaacaaggcctgggag
cggctcgagaaagccgagcacgagcgcgagctggccctgcgcacagagctcatccgccag
gagaagctggagcagctggccgcccgcttcgaccgcaaggccgccatgcgggagacctgg
ctcagcgagaaccagcgcctggtgtctcaggacaacttcggcctggagctggccgctgtg
gaggcagcagtgcggaagcacgaagccatcgagacggacatcgtggcctacagcggccgg
gtgcaggcggtggacgccgtggccgcagagctggccgccgagcactaccatgacatcaag
cgcatcgccgcgcggcagcacaacgtggcgcggctctgggacttcctgcggcagatggtg
gccgcccggcgggagaggctcctcctcaacctggagctgcagaaggtgttccaggacctg
ctctacctcatggactggatggaagagatgaagggccggctgcagtcccaggacctgggt
aaacacctgacgggagtggaggacctgctgcagctgcacgagctggtggaagctgacatt
gccgtgcaggccgagagggtgcgggcggtcagcgcctctgcactgcgcttctgcgacccc
gggaaagagtacaaaccctgtgacccccagctggtgtcggagcgggtggccaccctggag
aagagctatgagtcgctgtgcgaactggcagcggctcgcagggcccggctggaggagtcc
cggcggctctggcgcttcctctgggaggtgggcgaggctgaggcctgggtgcgggaacag
cagcacctcctggcctcagcggaaaccggccgggacctgaccggcgtcctccgcctgctc
aacaagcataccgccctgcggggcgagatgagcggccgcctggggcccctgaagctcact
ctggagcagggccagcagttagtggccgagggccaccctggggctggccaggcggccgcc
cgcaccgccgagctccaagcccagtgggagcggctggaagccctggcggaggagcgggcc
cagcggctcgcccaggccgccagcctctaccagtttcaggcggacgccaatgacatggag
gcctggctggtggacgcgctgcgcctggtgtccagccctgagctggggcacgacgagttc
tccacacaggccctggcccggcagcaccgggccctggaggaagagatccggggccaccgg
cccacgctggacgcgctgagggagcaggcagcggccctgccacccacgctgagccgcgca
cctgaggtgcagggccgtgtgcccaccctgcagcggcactatgaggagctgcgggcccgg
gcgggcgagcgtgcccgcgccctggaggccgccctggcgctctacaccatgctcagcgag
gccggggcctgcgggctttgggtggaggagaaggagcagtggctcaatgggctcgccctg
cccgagcgcctggaggacctggaggtcgtgcagcagaggtttgagaccctggagcccgaa
atgaacgcacttgctgcacgaattactgccgtgaatgacatcgcagaacagttgctgaag
gccaacccaccagggaaggacagcattgtcaacacccagaagcagctcaaccacaggtgg
cagcagtttcggtccctggcggacggcaagaaggcagccctgacgtcagccctgagcatc
cagaactaccacttagagtgcacggagacacaagcttggatgagagaaaagaccaaggtc
attgagtccacccagggcctgggtaacgacctggccggtgtgctggcgctgcagcgcaag
ctggctggcaccgagcgggacctggaggctattgccgcccgggtgggcgaactgacccga
gaggcaaatgccctggctgctggccaccccgcccaagcccctgccatcaacgcccggctt
ggagaggtgcaggccggctgggaggacctcagggccaccatgcggcggcgagaggagtcg
ctgggcgaggcacggcggctgcaggacttcctgcgcagcttggatgacttccaggcctgg
ctcggccgcacgcagacctccgtggcctctgaagaaggaccagccaccctacctgaagcc
gaggccctcctggcccaacatgcagccctgcggggagaggtggaacgggcccggagcgaa
tacagccggctgcgggccgtgggtgaggaggtgacccgggaccaggctgatccccagtgc
ctcttcctgcggcagcgactggaagcactgggaactggctgggaggagctgggccgcatg
tgggagagccggcaaggccgcctggcccaggcccatggcttccagggcttcctgcgggat
gctcgccaggccgaaggcgtcctcagcagtcaggaatatgtcttgtctcacacggagatg
ccagggaccctccaggcggccgatgccaccattaaaaaactggaggacttcatgagcacc
atggatgccaacggtgagcggatccgtggtcttctggaagccggacgccagctggtatcg
gaaggcaacgtccatgccgagaagatccaagagaaggcagactcggtggagaggagacac
aagaagaatcaagaagcggtgcagcagcttttgggccgtcttcgggacaaccgagagcag
cagcacttcctacaagactgtcacgagctgaagctctggattgacgagaagatgctgacg
gcgcaggacgtgtcctacgacgaggcccgcaacctgcacaccaagtggcagaaacaccag
gcgttcatggccgagctggccgccaacaaagactggctggacaaggtggacaaggaaggg
cgggagctgactctggaaaagccggagctgaaagctctggtgtgggagaagctggaggac
ctgcaccggcgctgggacgagctggagaccaccacccaggccaaagcccgcagcctcttt
gatgccaaccgagctgagctgtttgcccagagctgctccgccctggagagctggctggag
agcctgcaggcccagctgcactcggatgactacggcaaggacctcaccagcgtcaacatc
ctgctcaagaagcagcagatgctggaaagggagatggctgtgcgagagaaggaggtggag
gcgatccaggcgcaggcaaaagcgctggcccaggaagaccagggtgcaggggaggtggag
aggacctcgagggcagtggaggagaagttcagggccctgtgccagcccatggaggagcgc
tgccggcgcctgcaggcctcccgcgagcagcaccagttccaccgggacgtggaggatgag
atcttgtgggtgacggagcggctacccatggctagctccatggaacacggcaaggacctt
cccagtgtccagctcctcatgaagaagaaccagacgctgcagaaggagattcagggccat
gagccccggattgcggacctgacggagcggcagcgcactctgggcgcggcagcagcaggc
cctgagctggcggagctccaggaaatgtggaagcgcctgggccatgagctggagctgcga
gggaagcgactggaggaggccctgcgggcccagcagttctaccgcgatgctgcagaggct
gaggcctggatgggcgagcaggagttacacatgatgggccaggagaaggccaaggatgag
ctgagcgcccaggcggaggtgaagaagcatcaggtattggaacaagccctggccgactat
gcccagaccattcaccagctggcagccagcagccaagacatgattgaccacgagcatcca
gagagcacccggctgtcgatccgccaagcccaggtggacaagctgtacgccggcctgaag
gagctggcgggtgagcggcgggagcgtctgcaggagcacctccggctgtgccagctgcgc
cgggagctggacgacctggagcagtggatccaggagcgcgaggtggtggccgcctcgcac
gagctgggccaggactacgagcacgtgactatgctccgggacaaattccgcgagttctcg
cgggacacgagcaccatcggccaggagcgcgtggatggcgccaacgcgctggccaacggg
ctcatcgccgggggccacgccgcccgggccacagtggccgagtggaaggacagcctcaac
gaggcctgggctgacctgctggagctgctggacacgcggggccaggtgctggcggctgca
cacgagctgcagcgcttcctgcacggggcgcgccaagcactggcgcgcgtgcagcacaag
cagcagcagcttcccgacgggaccggccgggacctcaatgccgccgaggccctgcagcgc
cggcactgtgccttcgagcacgacatccaggccctcagcgcccaggtccagcaggtgcag
gacgacggccaccggctccagaaggcctatgccggcgacaaggccgaggagatcggccgc
cacatgcaggccgtggccgaggcctgggcgcagcttcaggggagctccgctgcccgccgc
cagctgctgctggacaccacggacaagttccgcttcttcaaggccgtccgggagctgatg
ctatggatggacggggtgaacctgcagatggacgcccaggagcggccccgggacgtgtct
tctgcagacctggtcatcaagaaccaccaaggcatcaaggccgagattgaggccagggcc
gaccgcttctcctcctgtgtcgacatggggcaggggctgctggccaggagccactatgcg
gcagaggagatctcagagaagctgtctcagcttcaggcacggcgtcaagagacagctgac
aagtggcaggagaagatggactggctgcagcttgttttggaggtgctggtgttcgggaga
gacgcaggtgtggcggaggcttggctgtgtagtcaggaaccactggtgcgaagcgctgag
ctgggctgcacggtcgatgaagtcgagagcctcatcaagcggcatgaggccttccagaag
tccgcagtggcctgggaggagcggttcagcgcgctggagaagctcacggcgctggaggaa
caggagaaggagcggaaaagaaagagggaggaagaggaacggaggaagctgccccctcct
ccagaacccccggccagtccacccgaagggcacctggtggacagccacacggcccctgct
gctccccgggacggagcacacccccgcctgccggccagtgtgaacggcatctgcacagat
gcagagggcccccagcccctgatagaacagcagagacttgagcagggcggcctcccagaa
gggcctgggtccggtgctggggacgaggccaacgggccacggggagagaagcaggcccgg
acacggggccctacccctccgataatgccccagagcaggtcatccgagtccgcccgggtc
gccaccttgcccactcgaggcccagagctctccgcccaggaacagatggaggggctgctg
tgccgcaaacaggagatggaggcctttggcaagaaggccgccaacaggtcgtggcagaac
gtgtactgtgtcctgcggcgcgggagccttggcttttacaaggatgcaaaggcagccagt
gcaggagtgccgtaccacggagaagtgcctgtcagcctggccagggcccagggcagcgtg
gcctttgattatcgaaagcgcaagcacgtcttcaagctgggcttacaagatgggaaggaa
tatctgttccaggccaaggatgaggcagagatgagctcgtggctgagggtggtgaatgca
gccattgccactgcgtcctctgcctccggagagcctgaagagccagcggtgcccagtgcc
acgcgaggcatgacccgggccatgaccatgcccccggtgtcaccggccggggctgaggga
cctgtcgtgcttcgcagtaaggatggcagagaacgagagcgagaaaagcgcttcagcttc
ttcaagaagaacaagtag
DBGET
integrated database retrieval system
