Capra hircus (goat): 102180525
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Entry
102180525 CDS
T02910
Symbol
KDM2B
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
chx
Capra hircus (goat)
Pathway
chx03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
102180525 (KDM2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
chx03000
]
102180525 (KDM2B)
04121 Ubiquitin system [BR:
chx04121
]
102180525 (KDM2B)
03036 Chromosome and associated proteins [BR:
chx03036
]
102180525 (KDM2B)
Enzymes [BR:
chx01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
102180525 (KDM2B)
Transcription factors [BR:
chx03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
102180525 (KDM2B)
Ubiquitin system [BR:
chx04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
102180525 (KDM2B)
Chromosome and associated proteins [BR:
chx03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
102180525 (KDM2B)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
102180525 (KDM2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
Cupin_8
JmjC
Motif
Other DBs
NCBI-GeneID:
102180525
NCBI-ProteinID:
XP_017916763
LinkDB
All DBs
Position
17:complement(17461469..17581321)
Genome browser
AA seq
1427 aa
AA seq
DB search
MPRKPVRGAPLAGYITRLPVEWAKLNTSRGWGPGSKGESSRNPFHGLQRCRRGVPCIGRR
LTLGGAGPSPYPDFRHLWLLRKVAPVPKVGCRGARGSCTCSSWAQGERRPPDPPIMSRAL
RFGSPQRPIDRQRYDENEDLSDVEEIVSARGFSLEEKLRSQLYQGDFVHAMEGKDFNYEY
VQREALRVPLVFREKDGLGIKMPDPDFTVRDVKLLVGSRRLVDVMDVNTQKGTEMSMSQF
VRYYETPEAQRDKLYNVISLEFSHTKLEHLVKRPTVVDLVDWVDNMWPQHLKEKQTEATN
AIAEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSVWYHVFRGGKIFWLIPPTLHNLALYEE
WVLSGKQSDIFLGDRVERCQRIELKQGYTFFIPSGWIHAVYTPVDSLVFGGNILHSFNVP
MQLRIYEIEDRTRVQPKFRYPFYYEMCWYVLERYVYCMTQRSYLTQEYQRESMLIDAPRK
PSIDGFSSDSWLEMEEESCEQQPQEEKEEEEEEEEEEEGAEKIPKASTDGPASPTSTPSE
DQEAPGKKPKAPAMRFLKRTLSNESEDSVKSATMPTDYPKTPTGSPATEVSAKWTHLTEF
ELKGLKALVEKLESLPENKKCVPEGIEDPQALLEGVKNVLKEHAEDDPSLAITGVPVVTW
PKKTPKNRAVGRPKGKLGPASAVKLAANRTTAGARRRRTRCRKCEACLRTECGECHFCKD
MKKFGGPGRMKQSCIMRQCIAPVLPHTAVCLVCGEAGKEDTVEEEEGKFNLMLMECSICN
EIIHPGCLKIKESEGVVNDELPNCWECPKCNHAGKTGKAYKQKRGPGFKYASNLPGSLLK
EQKMNRDNKEGQEPAKRRSECEEAPRRRSDEHPKKVPPDGILRRKSDDVHLRRKRKYEKP
QELSGRKRASTLQTSPGSSSHLSPRPPLGSSLSPWWRSSLTYFQQQLKPGKEDKLFRKKR
RSWKNAEDRITLPNKPLRRFKQEPEDDLPEAPPKTRESDHSRSSSPTAGPSTEGAEGPEE
KKKVKMRRKRRLPNKELSKELSKELNQEIQKTESSLAQENHQPIKSEPESENEEPKRPLG
LCERPHRFSKGLNGTPRELRHQLGPGLRSPPRVISRPPPSVSPPKCIQMERHVIRPPPIS
PPPDSLPLDDGAAHVMHREVWMAVFSYLSHQDLCVCMRVCKTWNRWCCDKRLWTRIDLNH
CKSITPLMLSGIIRRQPVSLDLSWTNISKKQLSWLINRLPGLRDLVLSGCSWIAVSALCS
SSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQMDNRSKLRNIVELRLAGLDITDAS
LRLIIRHMPLLSKLHLSYCNHVTDQSINLLTAVGTTTRDSLTEINLSDCNKVTDQCLSFF
KRCGNICHIDLRYCKQVTKEGCEQFIAEMSVSVQFGQVEEKLLQKLS
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcaagcccgtgcgcggagcccccctcgcgggttacataaccaggctcccggtc
gagtgggcaaaactcaacacctctcgggggtgggggcctggaagcaagggagagtcctcc
agaaatcccttccacggcctccaaagatgcaggaggggagtgccctgtatagggcgccgc
ctgaccctggggggtgcgggtccctctccttatcccgattttcggcatctttggcttctg
cgcaaagttgccccggtcccaaaggtggggtgcaggggggcgcgcggctcctgcacctgt
tcgagctgggcccagggtgagaggcgacccccagatcccccaataatgtcccgggctctc
cggtttgggtccccgcagcgcccgattgaccgccaaagatacgacgagaacgaggacttg
tcggacgtggaggagatcgtcagcgcccgcggcttcagcctggaggaaaagctgcgtagc
cagctgtatcagggggatttcgtgcacgccatggagggcaaagatttcaactatgagtat
gtgcagagagaagctctcagagttcccctggtatttcgagaaaaggatggcctgggaatt
aagatgcctgaccctgatttcacagtccgagatgtcaaactcctagtgggtagccggcgg
ctggtggacgtgatggacgtgaacacccagaaaggcacggagatgagcatgtcccagttc
gtacggtactacgagacgcccgaggcccagcgggacaagctatacaatgtcatcagcctt
gagttcagccacaccaagctggagcacttggtcaagcgtcccaccgtggtagacctggtg
gactgggtggacaacatgtggcctcagcacttgaaggagaagcagacggaagccacgaac
gccattgcagagatgaagtacccgaaagtgaagaagtactgtctgatgagtgtgaagggt
tgtttcactgacttccacatcgactttggaggcacttccgtttggtaccatgttttccgg
ggtgggaagatcttttggctgattcctccaaccttgcacaatttggcactgtatgaggag
tgggtgctgtcaggcaaacagagcgacatcttcctgggagaccgtgtggagcgatgccaa
agaattgagctgaaacagggctacacgtttttcatcccttccggctggatccatgcagtc
tacactcccgtagactctctggtgttcggcgggaacatcctgcacagcttcaacgtgccc
atgcagctgcggatctacgagatcgaggacagaacgcgggtgcagcccaaattccgttac
cccttctactatgagatgtgctggtatgtcttggagagatacgtgtactgtatgacccag
cggtcctacctcactcaggaataccagagagaatcaatgcttattgatgccccaagaaag
cccagcatagacggcttctcatctgattcctggctggagatggaggaggagtcctgtgag
cagcagccccaggaggagaaggaagaagaggaggaagaggaggaagaggaggagggtgca
gaaaagatccccaaagcatccaccgatggccctgcctcacccacgagcaccccatccgag
gaccaggaggcccccgggaagaagcccaaagcccctgccatgcggttcctcaaaaggact
ctgtcaaatgagtcagaggacagcgtgaagtctgccacgatgcccaccgactaccccaag
actcccaccggctctcctgccactgaggtctctgccaaatggacccacctcaccgagttt
gaactgaagggcctgaaagctctggtggagaaacttgaatccctcccggagaacaagaag
tgtgtccccgagggcatcgaggacccccaggccctcctggagggtgtgaagaacgtactg
aaggagcacgcggaggatgaccccagcctggccatcactggggtccccgtagtcacttgg
ccaaagaagacgccaaagaaccgggcggtaggtcggcccaaggggaagctgggcccggcc
tccgcggtgaagttggccgccaaccggaccacggcgggagctcgccggcgccggacgcga
tgccgcaagtgcgaggcctgcctgcggacggagtgcggcgagtgccacttctgcaaggac
atgaagaagttcgggggccccgggcggatgaagcagagctgcatcatgaggcagtgcatc
gcgccagtgctgcctcacaccgccgtgtgcctggtgtgtggcgaggcgggaaaagaggac
acagtggaagaggaagaaggcaagtttaacctcatgctcatggaatgctccatctgcaat
gaaatcatccaccctggatgccttaagattaaggagtcagagggcgtggtcaacgatgag
cttccaaactgctgggagtgtcccaagtgtaaccacgccggcaagaccgggaaagcctac
aagcaaaagcgtggccctggctttaagtacgcctccaacctgcctggctccctgctcaag
gagcagaagatgaaccgggacaacaaggaagggcaggagcctgccaagcggaggagtgag
tgtgaggaggcgccccggcgcaggtccgacgagcaccccaagaaggtgccccccgacggc
atcctgcgccgaaagtcggacgacgtgcacctgaggcggaagcggaaatacgagaagccc
caggagctgagtggacgcaagcgagcctcgacgcttcaaacgtcccccggttcctcctct
cacctctcgccgaggccccctctaggcagcagcctcagcccctggtggagatccagtctc
acttacttccagcagcagctaaaacccggcaaagaagataagcttttcaggaaaaagcgg
cggtcctggaagaacgccgaggaccggataactctgcccaacaagcctctccggcggttc
aagcaggaaccagaggacgacctgcccgaagcgccccccaagaccagggagagcgaccac
tcgcgctccagctcccctactgccgggccaagcacagagggcgcggaggggcccgaggag
aagaagaaggtgaagatgcgccggaagcgacggctccccaacaaggagctgagcaaggag
ctgagcaaggagctgaaccaggagatccagaagaccgagagtagcctggcccaggagaat
caccagcccatcaagtcggagcctgagagcgagaacgaggagcccaagcggcccctgggc
ctctgcgagcgcccccaccgcttcagtaaggggctcaacggcaccccccgggagctgcgg
caccagctggggcccggcctgcgcagcccgccccgagtcatttcccggccccctccctcc
gtgtcccctcccaagtgcatccagatggagcgacatgtgatccggccgccccccatcagc
cccccgcccgactcgctgcccctcgatgacggggcagcccacgtcatgcacagggaggtg
tggatggccgtcttcagctacctcagccaccaagacttgtgtgtctgcatgcgggtctgc
aagacctggaaccgctggtgctgcgataagcggttatggacccgcatcgatttgaaccac
tgcaagtccatcacgcccctgatgctaagtggcatcatccggcgacagcctgtctccctg
gacctcagctggaccaatatctccaagaaacagctgagctggcttatcaaccggttgcct
gggctccgagacttggtgctgtccggctgctcgtggatcgcagtctccgccctctgtagc
tccagctgtccactgctccggaccctggatgtccagtgggtagaagggctgaaggacgcc
cagatgcgggacctcctgtccccgcctacagacaacaggccaggtcagatggacaatcgg
agtaagctccggaacatcgtggagctgcgtctggccggcctagacatcacagacgcctcc
ctgcggcttatcatccgccacatgcccctgctctccaagctccacctcagttactgtaac
cacgtcactgaccagtccatcaacctgctcactgctgtgggcaccaccacccgggactcc
ttaaccgaaatcaacctgtcagactgcaataaggtgactgaccagtgcctgtccttcttc
aaacgctgtgggaatatctgtcacattgacctgaggtactgcaagcaagttaccaaggaa
ggctgtgagcagttcatagccgaaatgtctgttagtgtccagttcgggcaagtggaagaa
aaactcctgcaaaaactgagttag
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integrated database retrieval system
