Capra hircus (goat): 102180719
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Entry
102180719 CDS
T02910
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
chx
Capra hircus (goat)
Pathway
chx04514
Cell adhesion molecules
chx04520
Adherens junction
chx04910
Insulin signaling pathway
chx04931
Insulin resistance
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102180719 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
102180719 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
102180719 (PTPRF)
09160 Human Diseases
09167 Endocrine and metabolic disease
04931 Insulin resistance
102180719 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
chx01009
]
102180719 (PTPRF)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
chx04515
]
102180719 (PTPRF)
Enzymes [BR:
chx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
102180719 (PTPRF)
Protein phosphatases and associated proteins [BR:
chx01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
102180719 (PTPRF)
Cell adhesion molecules [BR:
chx04515
]
Immunoglobulin superfamily
Type II RPTP family
102180719 (PTPRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
PTP-SAK
Tc-R-P
Interfer-bind
DSPc
V-set
Y_phosphatase3
C2-set_2
PTPlike_phytase
PTP-NADK
Fn3_PTPRU
Insulin_TMD
ICAM_N
Motif
Other DBs
NCBI-GeneID:
102180719
NCBI-ProteinID:
XP_017898398
LinkDB
All DBs
Position
3:18260300..18344672
Genome browser
AA seq
1916 aa
AA seq
DB search
MTPEPAPGRTMVPLVPALVMLGLVAGAHGDSKPVFVKVPEDQTGLSGGVASFVCQATGEP
KPRITWMKKGKKVSSQRFEVIEFDDGAGSVLRIQPLRVQRDEAIYECTATNSLGEINTSA
KLSVLEAEQLPDGFPSIDMGPQLKVVEKARTATMLCAAGGDPDPEISWFKDFLPVDPAAS
NGRIKQLRSGALQIESSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVAPRFSIPPSS
QEVMPGGSVNLTCVAVGAPMPYVKWMMGAEELTKEDEMPVGRNVLELSNVVRSANYTCVA
ISSLGMIEATAQVTVKALPKPPVDLVVTETTATSVTLTWDSGNSEPVSYYGIQYRPAGAE
GPFQEVDGVATTRYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQAPSSPPRRV
QARMLSASTMLVQWEPPEEPNGLVRGYRVYYTPDSRRPLSAWHKHNTDAGLLTTVGSLLP
GITYSLRVLAFTAVGDGPPSPTIQVKTQQGVPAQPADFQAEADSDTRIQLSWLLPPQERI
VKYELVYWAAEDEGQQHKVTFDPTSSYTVEDLKPDTLYRFQLAARSELGVGVFTPTVEAR
TAQSTPSAPPQKVTCVSVGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRHVVD
GIGREHSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDVPSGPPRKVEVEPL
NSTAVRVSWKLPVPSKQHGQIRGYQVTYVRLENGEPRGAPIIQDVMLAEAQWQPEESEDY
ETTISGLTPETTYSITVAAYTTKGDGARSKPKIVTTTGAVPGRPTMMVSTTAMNTALLQW
HPPKELPGELLGYRLQYRRADEARPNTIDFGKDDQHFTVTGLHKGATYIFRLAAKNRAGL
GEEFEKEITTPEDVPSGFPQNLRVIGLTTSTTELIWDPPVLAERNGRITNYTVVYRDINS
QQELQNVTADTHLTLSGLKPDTTYDIKVRARTSKGAGPLSPSIQSRTMPVEQVFAKNFRV
EAAMKTSVLLSWEVPDSYKSAVPFRILYNGQSVEVDGHSMRKLIADLQPNTEYSFVLMNR
GSSAGGLQHLVSIRTAPDLLPHKPLPASAYVEDGRFTLTMPHVQDPSLVRWFYIMVVPID
RMAGSMLAPQWSTPEELELDELLEAIEQGGRERRRRQTERLKPYVAAQVDVLPETFTLGD
KKNYQGFYNRPLSPDLSYQCFVLASLKEPVDQKRYACSPYSDEIVVQVTPAQQQEEPELL
WVTGPVLAVILIVLIVIAILLFKRKRTHSPSSKDEQSIGLKDSLLAHSSDPVEMRRLNYQ
TPGSSVPSCPNISSMRDHPPIPITDLADNIERLKANDGLKFSQEYESIDPGQQFTWENSN
LEVNKPKNRYANVIAYDHSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQGPLPETM
GDFWRMVWEQRTATVVMMTRLEEKSRVKCDQYWPARGTETYGLIQVTLLDTVELATYTVR
TFALYKSGSSEKRELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPLDAGPMVVHCSAG
VGRTGCFIVIDAMLERMKHEKTVDVYGHVTCMRAQRNYMVQTEDQYVFIHEALLEAAACG
HTEVPARSLHAHIQKLGQVPPGESVTAMELEFKLLANSKAHTSRFISANLPCNKFKNRLV
NIMPYELTRVCLQPIRGVEGSDYINASFLDGYRQQKAYIATQGPLAESTEDFWRMLWEHN
STIIVMLTRLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQ
SRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFIT
LSIVLERMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5751 nt
NT seq
+upstream
nt +downstream
nt
atgacccctgagccagccccagggaggacgatggtgcccctcgtccctgcacttgtgatg
cttggtttggtggcaggtgcccatggtgacagcaaacctgtcttcgtcaaggtccccgag
gaccagactggattgtcaggaggggtggcctccttcgtgtgccaagccacgggggaaccc
aagccgcgcatcacatggatgaagaaggggaagaaagtcagctcccagcgctttgaggtc
attgagtttgatgacggggcagggtctgtgctgcggatccagccgttgcgggtgcagcga
gacgaagccatctatgagtgcacggccaccaacagtctgggggagatcaacaccagtgcc
aagctctcagtgctcgaagcggaacagctgcccgatgggttcccctccatcgacatgggg
cctcagctgaaggtggtggagaaggcccgcacggccaccatgctgtgcgcagcaggcggg
gatccagaccctgagatctcttggttcaaggactttctccctgtggacccagccgcgagc
aacggccgcatcaagcaactgcgttcaggtgccttgcagattgagagcagcgaggagtcg
gaccaaggcaagtacgagtgtgtggcgaccaactctgcaggcactcgttactcggcccct
gccaacctatacgtgcgagtgcgccgcgtggctccgcgtttctccatccctcccagcagc
caggaggtgatgccaggcggcagtgtgaacctgacatgcgtcgctgttggcgcacccatg
ccctacgtgaagtggatgatgggggcggaagagctcaccaaggaggacgagatgccagtc
ggccgcaacgtgctggagctcagcaacgtggtgcgctccgccaattacacctgcgtggcc
atctcctccctgggcatgatcgaggccacggcccaggtcaccgtgaaagccctgccgaag
cctccagttgacctggtggtgacagagaccactgccaccagcgtcacgctgacgtgggac
tccgggaactcggagcccgtatcctactacggcatccagtaccgcccagcgggcgcggag
ggccccttccaggaggtggacggcgtggccaccacccgctacagcatcggcggcctgagc
cctttctcagagtatgccttccgcgtgctggcggtgaacagcatcgggcgcgggccaccc
agcgaggcagtgcgggcgcgcacgggggagcaggcgccctccagccccccgcgccgcgtg
caggcgcgcatgctgagcgccagcaccatgctggtgcagtgggagccacccgaggagccc
aacggcctggtgcggggctaccgcgtctactacacccccgactcccgccgcccgctgagc
gcctggcacaagcacaacacggacgccgggctcctcaccaccgtgggcagcctgctgccc
ggcatcacctacagcctgcgcgtgctggccttcaccgccgtgggcgacggcccccccagc
cccaccatccaggtcaagacgcagcagggagtgcctgcccagcccgcggacttccaggcc
gaggcggactcagacaccaggatccagctctcgtggctgctgccccctcaggagcggatc
gtcaagtatgagctggtgtactgggcagcagaggatgagggccagcagcacaaggtgacc
ttcgaccccacatcctcctacaccgtagaggacctgaagcccgacacactgtaccgcttc
cagctggccgcccgctctgagctgggggtgggggtcttcaccccgactgttgaggctcgc
acggcgcagtccaccccctccgcacccccccagaaggtgacgtgtgtgagcgtgggctcc
accaccgtccgggtaagttgggtcccgccaccggccgacagccgcaacggcgtcatcacc
cagtactcagtggcctatgaggcggtggacggcgaggaccgcgggcggcacgtggtggac
ggcatcggccgcgagcactccagctgggacctggtgggcctggagaagtggacggagtac
cgggtatgggtgcgggcgcacacggacgtgggccccggccccgagagcagcccggtgctg
gtccgcaccgacgaggacgtgcccagtgggccaccgcggaaggtggaggtggagccactc
aactccactgccgtgcgcgtctcctggaagctgcctgtccccagcaagcagcatggccag
atccgcggctaccaggtcacctacgtgcggctggagaacggcgagccccgtggcgccccc
atcatccaggacgtcatgctggccgaggcccagtggcagccagaggagtcggaggactat
gaaaccaccatcagcggcctgaccccggagaccacctactccatcaccgtggccgcctac
accaccaagggggacggtgcccgcagcaagcccaaaattgtcacgaccacgggggcagtc
ccaggacggcccaccatgatggtcagcaccacggccatgaacacggcgctgctccagtgg
cacccgcccaaggagctgcccggggagctcctgggctaccggctgcagtaccgccgagct
gacgaggcgcggcccaacaccatcgattttggcaaggatgaccagcactttacggtcact
ggcctgcacaaaggggccacctacatcttccggctcgctgccaagaaccgggccggcctg
ggcgaggagtttgagaaggaaatcacgacccccgaggacgtgcccagcggtttcccccaa
aacctgcgcgtgatagggctgaccacatctaccacggaactgatctgggaccccccagtg
ttggcggagaggaacgggcgcatcaccaactacaccgtggtgtaccgtgacatcaatagc
cagcaggagcttcagaacgtcactgccgacacccatctgacgctctccggcctcaagcca
gataccacatacgacatcaaggtccgcgcacgcaccagcaaaggcgccggcccgctcagc
cccagcatccagtcccggaccatgcccgtggagcaagtgtttgccaagaacttccgtgtg
gaggctgcaatgaagacatccgtgctgctcagctgggaggtgcccgactcctacaagtca
gcagtgcccttcaggatcctgtacaatgggcagagcgtggaggtggacgggcactccatg
cggaagctgatcgcagacctgcagcccaacactgaatactcatttgtgctgatgaaccgc
ggcagcagcgcggggggcctgcaacacctcgtgtccatccgcacggcccccgacctcctg
ccgcacaagccactgccggcctcagcctacgtcgaggacggccgcttcaccctcaccatg
ccccacgtgcaggacccctcactcgtcaggtggttctacatcatggtggtgcccatcgac
cgcatggcagggagcatgctggcgccacagtggagcacgcccgaggagctggagctggac
gagctgctggaggccatcgagcagggcggcagggagcggcgccggcggcagacggagcgg
ctgaagccatatgtggccgctcaggtggacgttctcccggagaccttcaccctaggggac
aagaagaactaccagggcttctacaaccggccgctgtctccagacctgagctaccagtgc
tttgtgctcgcctccctgaaggaacccgtggaccagaagcgctatgcctgcagcccctac
tccgacgagatcgtggtccaggtgacaccagcccagcagcaggaggaacccgagctgctg
tgggtgacgggccctgtcctggcagtcatcctcatcgtcctcattgtcatcgccattctt
ctgttcaagaggaaaaggacccactccccatcgtccaaggacgagcagtcaattgggctg
aaggactccttgctggcccactcctccgaccctgtggagatgcggcggctcaactaccag
accccaggttccagtgtccccagttgcccgaatatctcaagtatgcgagaccacccgccc
atccccatcaccgacctagctgacaacatcgagcgcctcaaagccaatgacggcctcaag
ttctcccaggagtacgagtcaattgacccgggacagcagttcacgtgggagaattcaaac
ctggaggtgaacaagccgaagaaccgctacgccaacgtcattgcttacgaccactctcga
gtcatccttacctccatcgacggtgtccccgggagcgactacatcaacgccaactacatc
gacggctaccgcaagcagaacgcctacattgccacgcagggcccgctgcctgagaccatg
ggcgatttctggcggatggtgtgggaacagcgcacagccactgtggtcatgatgacgcgg
ctggaggagaagtcccgggtgaaatgtgatcagtactggccggctcgtggcaccgagacc
tacggcctcatccaggtgaccctgctggacacagtggagctggccacctatactgtgcgc
acctttgcgctctacaagagtggctccagtgagaagcgggagctgcgtcagttccagttc
atggcctggccagaccacggagtccccgagtacccgaccccgatcctggccttcctgcgg
cgggttaaggcttgcaaccccctagacgcagggcccatggtggtgcactgcagcgcgggc
gtgggccgcacgggctgcttcatcgtcattgacgccatgctggagcggatgaagcacgag
aagacagtggacgtctatggccacgtgacgtgcatgcgggcgcagcgcaactacatggtg
cagaccgaggaccagtacgtgttcatccacgaggcgctgctggaggccgccgcgtgcggg
cacacggaggtgcctgcccgcagcctccatgcccacatccagaagctgggccaagtgccg
cccggggagagcgtgactgccatggagctggagttcaagctgctggccaactccaaggcc
cacacatcccgcttcatcagcgccaacctgccctgcaacaagttcaagaaccgcctggtg
aacatcatgccctacgaactgacccgtgtgtgtctgcagcccatccgcggcgtggagggc
tctgattacatcaatgccagcttcctggatggctatagacagcagaaggcctacatagcc
acacaggggcctctggcggagagcaccgaggacttctggcgcatgttgtgggagcacaac
tccaccatcatcgtcatgctgaccaggcttcgggagatgggcagggagaaatgccaccag
tactggcctgcagagcgctctgctcgctaccagtactttgttgtcgacccgatggccgag
tacaacatgccccagtatattctccgagagttcaaggtcacggacgcccgggatgggcag
tcgaggacgatccggcagttccagttcacagactggccagagcagggcgtgcctaagacg
ggcgagggcttcatcgacttcatcgggcaggtgcacaagaccaaggagcagttcgggcag
gacgggcccatcacggtgcactgcagtgctggtgtgggccgcaccggggtgttcatcaca
ctgagcatcgtcctggagcggatgcgctacgaaggcgtggttgacatgttccagaccgtg
aagaccctgcgcacacagcgcccggccatggtgcagacggaggaccagtaccagctgtgc
taccgcgcggccctggagtacctcggcagctttgaccactatgcaacgtaa
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integrated database retrieval system
