Capra hircus (goat): 102180982
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Entry
102180982 CDS
T02910
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
chx
Capra hircus (goat)
Pathway
chx00310
Lysine degradation
chx01100
Metabolic pathways
chx04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
102180982 (SETDB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
102180982 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
chx03036
]
102180982 (SETDB1)
Enzymes [BR:
chx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
102180982 (SETDB1)
Chromosome and associated proteins [BR:
chx03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
102180982 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
102180982 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
SET
MBD
Pre-SET
Chromo_MORC2_6th
DUF4537
Chromo
Motif
Other DBs
NCBI-GeneID:
102180982
NCBI-ProteinID:
XP_005677701
UniProt:
A0A452E4W2
LinkDB
All DBs
Position
3:100333303..100362929
Genome browser
AA seq
1287 aa
AA seq
DB search
MSSLPGCIGLAAATAAVESEEIAELQQSVVEELGISMEELRQFIDEELEKMDCVQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDEASRPT
EIIEIPDEDDDVLSIDSGDAGNRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLSQMPGELSKDGDLVVSMRILGKKRTKTWHKGTLIAIQTVGSGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTSTGTQFKPTEPPQPTAPPAPPAPALSPQAGDSESLEGQLA
QSRKQVAKKSTSFRPGSVGSGHSSPTSPALSENAPGGKPGINQTYRSPLGSTTSAPAPPA
PPAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMRSEQYRGKNPLLVPL
LYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDFLFLEMFCLDPYV
LVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVFINTGPE
FLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQINPNSGYQYKRLEECLPTGVYECNKR
CKCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADK
EGLEMGDEYFANLDHIESVENFKEGYESDAPCSSDSSGVDLKDQEDGNSGTEDPEESNDD
SSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSEMSSKDSRPPDLGPPHIPVPPSIP
VGGCNPPSSEETSKNKVASWLSCNSISEGGFADSDSHSSFKTSEGGEGRTGGGRGEAEKA
STSGLGFKDEGDIKQAKKEDPDDRNRMSIVTESSRNYGYNPSPVKPEGLRRPPSKTSMHQ
SRRLVASAQPNPDDILTLSSSTESEGESGTSRKPTAGQTSATAMDSDDIQTISSGSEGDD
FEDKKNMSGPMKRQVAVKSTRGFALKSTHGIAIKSTNMASVEKGESAPVRKNTRQFYDGE
ESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWD
YNYEVGSVEGKELLCCCGAIECRGRLL
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccctccctgggtgcattggtttggcagcagcaacagcagcagtggagtctgaa
gaaattgcagagctgcaacagtccgtggttgaggagctgggtatctcaatggaggagctt
cgacagttcattgatgaagaactggaaaagatggactgtgtacagcagcgcaagaagcaa
ctagcagagttggagacttgggtaatacagaaggaatctgaggtggcccatgttgaccaa
ctctttgatgatgcatccagggcagtgactaactgtgagtctttggtgaaggacttttat
tccaaactgggactacagtaccgggacagcagctctgaagatgaagcttcccggcctaca
gaaataattgagattcctgatgaagacgatgatgtcctcagtattgattcaggtgatgct
gggaacagaactccaaaagaccagaagctccgtgaagctatggctgccttaagaaaatcg
gctcaagatgtccagaagttcatggatgctgtcaacaagaagagtagttcccaggatctt
cacaaaggaacgttgagccagatgcctggagaactgagcaaagatggtgacttggtcgtc
agcatgcgcatccttggcaaaaagagaactaagacgtggcacaaaggcacccttattgcc
atccagacggttgggtcaggaaagaagtacaaggtgaaatttgacaacaaaggaaagagt
cttctgtcaggaaaccacattgcctacgattaccaccctcctgctgacaagttgtatgtg
ggcagtcgagtagtggccaaatacaaagatgggaatcaggtctggctctatgctggcatt
gtagctgagacaccaaacgtcaaaaacaagctcaggtttctcatcttctttgatgatggc
tatgcttcctatgttacacagtctgaactatatcccatttgccggccactgaaaaagact
tgggaggacatagaagacatctcctgccgagacttcatagaagagtatatcaccgcttac
cccaaccgccccatggtgttgctcaagagtggccagctgatcaagactgagtgggaaggc
acgtggtggaagtcccgagtcgaggaggtggacggcagcctagtcaggatcctctttctg
gatgacaaaagatgtgaatggatctatcgaggctctacacgactggagcccatgttcagc
atgaagacatcatccgcctctgcactagagaagaagcaagggggacagctcagaacacgt
ccaaatatgggtgctgtgagaagcaaaggtcccgtggtccagtacactcaggatctaaca
agtactggaacccagttcaagcctacggaacccccacagccgacagccccacctgcccca
cctgctccagctctgtccccccaggcaggtgacagtgaaagcttggaaggccagcttgcc
caatctcggaagcaggtagccaaaaaaagcacatctttccggccaggatctgtgggctct
ggtcattcctcccctacatcccctgcactcagtgaaaatgcccctggtgggaaacctggg
atcaatcagacatataggtcacctttaggctccacaacctctgccccagctcccccagct
cccccagctcccccagccttccatggcatgctggagcgggcccctgcagagccctcctac
cgtgcccccatggagaagcttttctacttacctcatgtctgcagctatacttgtctgtct
cgagtcagacctatgagaagtgagcagtatcggggcaagaaccctctgttagtcccacta
ctctatgacttccggcgaatgacagcccggcgccgagttaaccgcaagatgggctttcat
gttatctataagacaccctgtggcctctgccttcggacaatgcaggagattgagcgttac
ctttttgagactggctgtgacttcctcttcctggagatgttctgtttggatccgtatgtt
cttgtggaccgaaagtttcagccctataagcctttttactatattttggacatcacctat
gggaaggaagacgttcctctatcctgcgttaacgagattgacacaactcccccaccccag
gtggcctacagcaaggaacggatcccgggcaaaggtgttttcattaacacaggccctgaa
tttcttgtcggctgtgactgcaaagatgggtgccgggacaagtccaagtgtgcctgccat
cagctaactatccaggctacagcctgcaccccaggaggccaaatcaaccccaactctggc
taccaatacaagagactagaagaatgtctgcccacaggagtttatgagtgtaacaaacgc
tgcaaatgtgaccctaacatgtgcacaaaccgcttggtacagcatggcctgcaagttcgt
ctgcagctcttcaagacccagaacaagggctggggtatccgttgcttggatgatattgcc
aaaggctcctttgtctgtatttatgcagggaagatcctgacagatgactttgctgacaag
gagggcctagaaatgggtgatgagtactttgccaatctggaccatattgagagcgtggag
aacttcaaggaggggtatgagagtgatgccccctgttcctctgacagcagtggtgtagac
ttgaaggaccaggaagatggcaacagcggtacagaggaccctgaggagtccaatgacgac
agctcagatgacaatttctgtaaggacgaggacttcagcaccagctcggtgtggcgcagc
tatgctacccgacggcagacccgcggccagaaggagaatggattgtctgagatgtcttcc
aaggactctcgccccccagacctagggcccccacatattcctgtccctccatcaatccct
gtaggtggctgcaatccaccttcctctgaagagacatctaagaacaaagtggcctcgtgg
ttgagctgcaacagtatcagtgaaggtggctttgctgactctgatagccattcatccttc
aagactagtgaaggtggggaaggccgcactgggggaggcagaggggaagctgagaaggct
tccacctcagggctgggcttcaaggatgagggagacatcaagcaggccaagaaagaggac
cctgatgaccgaaacaggatgtcgatagttactgaaagctctcgaaattatggttataat
ccttctcctgtgaagcctgaaggacttcgccgcccaccaagtaagactagtatgcatcag
agccgacgactcgtggcctctgctcagccaaaccctgatgatatcctgaccctgtccagc
agcacagaaagtgagggggaaagtgggaccagccggaagcccactgctggccagacttca
gccacagccatggacagtgatgatatccagaccatctcctctggctctgaaggggatgac
tttgaggacaagaagaacatgtctggtccaatgaagcgccaagtggcagtaaaatccacc
cggggttttgctttgaaatcaacccatgggattgccattaaatcaaccaacatggcatcc
gtggaaaagggggagagtgcacctgttcgtaagaacacacgccagttctacgatggggag
gagtcttgctacatcatcgatgccaagcttgaaggcaacctgggccgctacctcaatcac
agttgcagccccaacctgtttgtccagaatgtcttcgtggatactcatgatctccgcttc
ccgtgggtggccttctttgccagcaagagaatccgggctggcactgagctcacctgggac
tacaactatgaggtgggcagcgtggagggcaaggagctgctttgctgctgcggggccatc
gaatgccgagggcgtcttctttag
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