KEGG   Capra hircus (goat): 102187356
Entry
102187356         CDS       T02910                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DO beta chain
  KO
K06752  MHC class II antigen
Organism
chx  Capra hircus (goat)
Pathway
chx04145  Phagosome
chx04514  Cell adhesion molecules
chx04612  Antigen processing and presentation
chx04640  Hematopoietic cell lineage
chx04658  Th1 and Th2 cell differentiation
chx04659  Th17 cell differentiation
chx04672  Intestinal immune network for IgA production
chx04940  Type I diabetes mellitus
chx05140  Leishmaniasis
chx05145  Toxoplasmosis
chx05150  Staphylococcus aureus infection
chx05152  Tuberculosis
chx05164  Influenza A
chx05166  Human T-cell leukemia virus 1 infection
chx05168  Herpes simplex virus 1 infection
chx05169  Epstein-Barr virus infection
chx05310  Asthma
chx05320  Autoimmune thyroid disease
chx05321  Inflammatory bowel disease
chx05322  Systemic lupus erythematosus
chx05323  Rheumatoid arthritis
chx05330  Allograft rejection
chx05332  Graft-versus-host disease
chx05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:chx00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    102187356
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    102187356
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    102187356
   04612 Antigen processing and presentation
    102187356
   04658 Th1 and Th2 cell differentiation
    102187356
   04659 Th17 cell differentiation
    102187356
   04672 Intestinal immune network for IgA production
    102187356
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    102187356
   05164 Influenza A
    102187356
   05168 Herpes simplex virus 1 infection
    102187356
   05169 Epstein-Barr virus infection
    102187356
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    102187356
   05152 Tuberculosis
    102187356
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    102187356
   05140 Leishmaniasis
    102187356
  09163 Immune disease
   05310 Asthma
    102187356
   05322 Systemic lupus erythematosus
    102187356
   05323 Rheumatoid arthritis
    102187356
   05320 Autoimmune thyroid disease
    102187356
   05321 Inflammatory bowel disease
    102187356
   05330 Allograft rejection
    102187356
   05332 Graft-versus-host disease
    102187356
  09166 Cardiovascular disease
   05416 Viral myocarditis
    102187356
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    102187356
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:chx04147]
    102187356
Exosome [BR:chx04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102187356
  Exosomal proteins of epithelial cells
   102187356
  Exosomal proteins of breast milk
   102187356
SSDB
Motif
Pfam: MHC_II_beta C1-set Ig_3 ig DUF7550 C2-set_2 DUF1538
Other DBs
NCBI-GeneID: 102187356
NCBI-ProteinID: XP_005696263
LinkDB
Position
23:41539650..41548629
AA seq 285 aa
MEIFLSCLLSSRMSPIWVPWVVAFSSTVLRLDASMTQGRDSPEDFVTQAKADCYFTNGTE
KVRFVVRFIFNLEEYARFDSDLGMFVALTELGKPDAELWNNRPDILARSRASVDMLCRRN
YNLGAPFTVGRRVQPEVTVYPEKTPALQHRNLLLCLVTGFYPGDIKVTWFRNGQEQREGV
MSTGLIRNGDWTFQTTVMLPMTPELGEVYTCLVDHPSLPSPVSVEWRAQSEYSWRKMLSG
AAAFLVGLVFFLVGIAIHIRARKGHVETPLLGNEVPRAVLPPQPH
NT seq 858 nt   +upstreamnt  +downstreamnt
atggagattttcctgtcttgtttgctttcttccagaatgagtcctatttgggttccctgg
gtggtggccttctcatccacggttctcaggctggatgcttctatgactcaaggcagagat
tctccagaagattttgtgacccaggcaaaggctgactgttacttcaccaatgggacagaa
aaggtgcggtttgtggtcagattcatcttcaacctggaggagtatgcacgtttcgacagc
gacttgggaatgtttgtggccttgacggagctgggcaagcccgatgctgagctgtggaac
aatcggccagatatactggcgaggagtagagcctctgtggacatgctttgcagacgcaac
tacaatctgggagcacccttcaccgtggggaggagagtgcaaccagaggtgacagtgtat
ccggagaagaccccagccctgcagcaccgcaatctgctgctttgcttggtgacaggtttc
tacccaggggacatcaaggtcacctggttccggaatgggcaggaacaaagagagggggtc
atgtccaccggcctcatcaggaatggagactggacctttcagacgacggtgatgctgccc
atgacgcctgagcttggagaggtctacacctgccttgttgaccatcccagcttgccgagc
cctgtttctgtggagtggagagctcagtctgaatattcttggagaaagatgctgagtgga
gctgcagccttcctggtcgggctagtcttctttctggtgggaattgccatccacatcagg
gcccggaaaggacatgtggagactccgttgcttggcaatgaggtcccaagagcagtgctt
ccaccacagccgcactag

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