Capra hircus (goat): 102188830
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Entry
102188830 CDS
T02910
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1
KO
K02084
apoptotic protease-activating factor
Organism
chx
Capra hircus (goat)
Pathway
chx01524
Platinum drug resistance
chx04115
p53 signaling pathway
chx04210
Apoptosis
chx04215
Apoptosis - multiple species
chx05010
Alzheimer disease
chx05012
Parkinson disease
chx05014
Amyotrophic lateral sclerosis
chx05016
Huntington disease
chx05020
Prion disease
chx05022
Pathways of neurodegeneration - multiple diseases
chx05134
Legionellosis
chx05152
Tuberculosis
chx05160
Hepatitis C
chx05161
Hepatitis B
chx05162
Measles
chx05164
Influenza A
chx05168
Herpes simplex virus 1 infection
chx05169
Epstein-Barr virus infection
chx05200
Pathways in cancer
chx05222
Small cell lung cancer
chx05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
102188830 (APAF1)
04215 Apoptosis - multiple species
102188830 (APAF1)
04115 p53 signaling pathway
102188830 (APAF1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102188830 (APAF1)
09162 Cancer: specific types
05222 Small cell lung cancer
102188830 (APAF1)
09172 Infectious disease: viral
05161 Hepatitis B
102188830 (APAF1)
05160 Hepatitis C
102188830 (APAF1)
05164 Influenza A
102188830 (APAF1)
05162 Measles
102188830 (APAF1)
05168 Herpes simplex virus 1 infection
102188830 (APAF1)
05169 Epstein-Barr virus infection
102188830 (APAF1)
09171 Infectious disease: bacterial
05134 Legionellosis
102188830 (APAF1)
05152 Tuberculosis
102188830 (APAF1)
09164 Neurodegenerative disease
05010 Alzheimer disease
102188830 (APAF1)
05012 Parkinson disease
102188830 (APAF1)
05014 Amyotrophic lateral sclerosis
102188830 (APAF1)
05016 Huntington disease
102188830 (APAF1)
05020 Prion disease
102188830 (APAF1)
05022 Pathways of neurodegeneration - multiple diseases
102188830 (APAF1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
102188830 (APAF1)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
102188830 (APAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
NB-ARC
WD40_CDC20-Fz
APAF1_C
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
APAF-1-like_WHD
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
CARD
Beta-prop_Vps41
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
RMC1_N
Beta-prop_HPS5
WD40_like
Beta-prop_DCAF12
Ge1_WD40
WD40_RFWD3
Beta-prop_NWD2_C
Beta-prop_WDR11_2nd
CARD_2
PEP5_VPS11_N
Beta-prop_DCAF4
Beta-prop_VPS8
AAA_16
Beta-prop_SPT8
Utp8_b_propeller
AAA_22
ATPase_2
NPHP3_N
Hira
AAA_18
NACHT
nSTAND1
Motif
Other DBs
NCBI-GeneID:
102188830
NCBI-ProteinID:
NP_001301104
UniProt:
A0A0F6QJN8
LinkDB
All DBs
Position
5:61494929..61577408
Genome browser
AA seq
1249 aa
AA seq
DB search
MDAKARNCLLQHREALERDIKTSYIMDHMISNGVLTVSEEEKVKNEPTQRQRAAMLIKMI
LKKDNHSYISFYNALLHEGYRDLAALLHGGIPVVSSSDGKDSVSGITSYVRTVLCEGGVP
QRPVVFVTRKKLVNAIQQKLSKLNGEPGWVTIYGMAGCGKSVLAAEAVRDHSFLEDCFPG
GVHWVSVGKQDKSGLLMKLQNLCARLDQDESFSQRLPLNIEEAKDRLRILMLRKHPRSLL
ILDDIWDPWVLKAFDNQCRILLTTRDKSVTDSVMGPKYVVPVESGLGKEKALEILSLFVN
MKKADLPEQAHSIIQECKGSPLVVSLIGALLRDFPNRWEYYLRQLQNKQFKRIRKSSSYD
YEALDEAMSISVEMLREDIKDYYTDLSIVQKDVKVPTKVLCILWDLETEEVEDILQEFVN
KSLLFCDRNGKSFLYYLHDLQVDFLTEKNRSQLQDLHKKMVTQFQRHHQLYSLTPDQEDC
MYWYNFLAYHMASANMHKELCALMFSLDWIKAKTELVGPAHLIHEFVEYRHILDEKDGTD
CENFQEFLSLNGHLLGRQPFPNIVQLGLCELETSEVYRQAKLQAKQEVDNGMLYLEWVNK
KNMKNLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEV
LCCAFSADDRFIATCSVDKKVKIWNSMTGELVRIYDEHSEQVNCCHFTNNSSHLLLATGS
NDYFLKLWDLNQEECRNTMFGHTNSVSHCRFSPDDQVLASCSADGTLKLWDVKSANERKS
INVKQFFLNSEEPQEDLEVIVKCCSWSADGAKIMVAAKNKVFLFDIHTSGLLAEIHMGHH
STVQYCDFSPHNHLAVVALSQYCVELWSMDSGLKVADCRGHLSWVHCVMFSPDGSSFLTS
SDDQTVRLWETKKVCKNSATVLKQEIDVVFQEKEVTVLAVDNIRRLQLINGNTGQIDYLT
EAQVSCCCLSPHLQYLAFGAEDGAIQILELLNNRIFQSRNAHKTTVRHIQFTADGKTLIS
SSDDSAIQIWNWQSEDPFFLQAHQETVKDFKLLKNSRLLSWSFDGTVKVWNITTRRIEKD
FVCHQDTVLSCDISSDGAKFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCSSFSVDNT
MLATGDDNGEIRMWNVSNGELLHLCAPISVEEGAATHGGWVTDLCFSPDNKMLVSAGGYL
KWWNVVTGESSQTFYTNGTNLKKIHVSPDFKTYVTVDNLGILYILKILE
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaaaagctcgaaattgtttgcttcaacatcgagaagccttggaaagggacatc
aaaacatcctacatcatggatcacatgattagtaatggcgttttaacagtgtcagaggag
gaaaaagtgaaaaatgagcccacccaacggcaacgagcagctatgctaattaaaatgata
cttaaaaaagataatcattcctatatatcattctacaatgctctacttcatgaaggttac
agagatcttgctgccctgctgcatggtggcattcctgtcgtctcttcttccgatggcaaa
gattcagttagtggaataacttcatatgtaaggacagtcctgtgtgaaggtggagtacca
cagaggcccgttgtttttgttactaggaagaagctagtgaatgcaattcagcagaagctc
tccaaactgaatggtgaaccgggatgggtcaccatatatggaatggcaggttgtgggaaa
tctgtattagctgcagaagctgttcgagatcattctttcctagaagattgtttcccaggg
ggcgtgcattgggtgtcagttgggaaacaggacaaatctgggcttctgatgaagctacag
aacctttgcgcacgattggatcaggatgaaagcttctcccagaggcttccacttaatatt
gaagaggctaaagatcgtctccgcattctgatgctgcgcaaacatccaaggtctttattg
atcttggatgatatttgggatccttgggtgttaaaagcttttgacaatcagtgtcgaatt
cttctcacaaccagagataagagtgttacagattcagtaatgggtcctaaatatgtagtg
cctgtggagagtggtttaggaaaagaaaaagcacttgaaattttatccctttttgttaat
atgaagaaagcagatttgccagaacaagctcacagtattatacaagaatgtaaaggttcc
cctcttgtagtgtctttaattggtgcacttttacgagattttcccaaccgctgggagtac
tacctcaggcaacttcagaataagcaatttaagaggataagaaaatcttcatcttatgac
tatgaggctctagatgaagccatgtctataagtgttgaaatgctcagagaagacatcaaa
gattattacacagatctttccatcgttcagaaagatgttaaggtgcctacaaaggtgtta
tgtatcctctgggacttagaaacggaagaagttgaagacatattacaggaatttgttaat
aagtctctcttgttctgtgaccggaatggaaaatcatttctttattatttacatgatctg
caagtagatttccttactgaaaagaatcgcagccagcttcaggatctccacaagaagatg
gtcactcagttccagagacatcaccagttatattctcttacaccagatcaggaggattgc
atgtattggtacaattttctggcctatcacatggccagtgctaatatgcacaaagaactg
tgtgctttaatgttttccctggattggattaaagcaaaaacagaacttgtaggccctgct
catctgattcatgaatttgtggaatacaggcatatattggatgaaaaggatggtacagac
tgtgagaatttccaggagtttttatctttaaatgggcatcttcttggacgacagccattt
cctaatattgtgcaactgggcctctgtgaactggaaacttcagaggtttatcggcaagct
aagctgcaggccaagcaggaggtcgataacggaatgctttacctggagtgggtaaacaaa
aaaaacatgaagaacctctcccgcttggttgtccgcccccatacagatgctgtttaccat
gcttgcttttctgaagatggtcaaagaatagcttcttgtggagctgataaaactttacag
gtattcaaagctgaaacaggagagaaacttctagaaatcaaggctcatgaggatgaagtg
ctttgctgtgcattctctgcagatgacagatttatagcaacctgctcagtggataaaaaa
gtgaagatttggaattcaatgactggggaactagtgcgtatctatgatgagcactcagag
caagtcaattgctgccacttcaccaacaacagtagtcaccttctcttagccactggttca
aatgactacttccttaaactctgggatctgaatcaagaagaatgtcgaaataccatgttt
ggccatacaaattcagtcagtcactgcagattttcaccagatgatcaggttttggccagt
tgttcagctgatggaacattaaagctttgggatgtgaaatccgcaaatgagaggaaaagc
attaatgtgaagcagttcttcctgaattcagaggagcctcaggaggatctggaagtgata
gtgaaatgctgttcgtggtctgctgatggtgctaagataatggtggccgcgaaaaataaa
gtctttctttttgacattcacaccagtggcctgttggcagaaatccacatgggccatcat
agcactgtccagtactgtgacttctccccccacaaccatttggcagtggtggctttgtcc
cagtactgtgtggagttgtggagtatggactcaggtttaaaagtagctgattgcagagga
catttaagttgggtccattgtgtgatgttttctcctgatggatcatcatttttgacatct
tctgatgaccagacagtcaggctctgggagacaaagaaagtatgtaagaactctgctaca
gtgttaaagcaagagatagatgttgtgtttcaagaaaaggaagtgacggttcttgcagtt
gacaatataagacgtctgcaactcattaatggaaacacaggtcagattgattacctaact
gaagctcaagtgagttgctgttgtttaagtccacatcttcagtaccttgcattcggagct
gaagatggagccattcagattttagaactcctgaacaacagaatcttccaatccaggaat
gcgcacaaaaccactgttcggcacatccagttcacagctgatggaaagactcttatctca
agctctgatgattctgcaattcagatatggaattggcagtcagaggaccctttctttctc
caagcccaccaggaaacagtgaaagactttaaactcttgaaaaattcaagactgctttcc
tggtcatttgatggaacagtaaaggtatggaatattactaccagaagaatagaaaaagat
tttgtgtgtcaccaggatacagttctttcttgtgatatttcctctgatggcgctaagttt
tcttctacctctgctgacaagactgcaaagatttggagttttgaactcctttctcctctt
catgaattgagaggccacaaaggctgtgtgcgctgctcttccttctctgtggacaatacc
atgttggcgactggagacgacaatggagaaatcaggatgtggaatgtctcaaacggtgag
cttcttcatttgtgtgctccaatttcagtagaagaaggagctgctactcatggaggctgg
gtgaccgatctttgcttttctccagacaacaaaatgcttgtttctgctggcggatatctc
aagtggtggaatgttgtcactggggaatcctcacagaccttctacacaaacggaaccaat
cttaagaaaatacatgtgtcccctgacttcaaaacatatgtgactgttgataatcttggt
attttatatattttaaagattttagagtaa
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integrated database retrieval system
