Carboxydothermus hydrogenoformans: CHY_1121
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Entry
CHY_1121 CDS
T00287
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
chy
Carboxydothermus hydrogenoformans
Pathway
chy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
chy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CHY_1121 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chy03400
]
CHY_1121 (nth)
Enzymes [BR:
chy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CHY_1121 (nth)
DNA repair and recombination proteins [BR:
chy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CHY_1121 (nth)
Prokaryotic type
CHY_1121 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
RecR_HhH
DUF2400
Ogg-HhH
HHH_8
Cdd1
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ABB14079
UniProt:
Q3AD17
LinkDB
All DBs
Position
995456..996088
Genome browser
AA seq
210 aa
AA seq
DB search
MTGKKAHKIAAELEKLFPVAKTELNFQNIFQLLVAVVLSAQSTDRQVNKVTEKLFLFVKE
PRDLLDMGEEELSRQIRSLGLYRNKARNLIKIAEILDREYHGQVPDSFAELLKLPGVGPK
TAEVIVGVGFNKPSFPVDTHVFRVARRLGLSKARTPEGVSFDLKKIFPPNSWIDLHHRLI
FFGRRICKAQKPSCNICPFPEFCQKEESDV
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggaaaaaaagcacataaaattgctgcagagttagaaaaactttttcccgtggca
aaaacggagttaaatttccaaaatatttttcagctgcttgtggcagtggtgttatcggcg
caaagtaccgaccggcaggtaaataaagtaacggaaaaactttttttatttgtaaaggag
cccagggatttattagatatgggagaagaggagttatcccggcaaattcgttctttgggt
ttgtaccggaataaagcgagaaatttaattaaaattgctgaaatcctggacagggagtat
catggtcaagtacctgatagttttgctgaacttcttaaacttccgggggttggaccgaaa
actgcggaggttattgtgggagttggttttaataaaccttcctttccggtggatacccat
gtttttagggtagcccggcgtcttgggttatcgaaagccagaacgccggaaggcgtatct
tttgatttgaaaaaaatttttcctccaaatagctggatagacttacaccatcgcttaatt
tttttcggaagaagaatatgtaaggcccaaaagccaagctgcaatatctgtccttttccg
gaattttgccaaaaggaggagtccgatgtttaa
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