Calycomorphotria hydatis: V22_00540 Help Entry V22_00540         CDS       T09810                                  Symbol ligA Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism chya  Calycomorphotria hydatis Pathway chya03030   DNA replication chya03410   Base excision repair chya03420   Nucleotide excision repair chya03430   Mismatch repair Brite KEGG Orthology (KO) [BR:chya00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     V22_00540 (ligA)    03410 Base excision repair     V22_00540 (ligA)    03420 Nucleotide excision repair     V22_00540 (ligA)    03430 Mismatch repair     V22_00540 (ligA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:chya03032]     V22_00540 (ligA)    03400 DNA repair and recombination proteins [BR:chya03400]     V22_00540 (ligA) Enzymes [BR:chya01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      V22_00540 (ligA) DNA replication proteins [BR:chya03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      V22_00540 (ligA) DNA repair and recombination proteins [BR:chya03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      V22_00540 (ligA)    NER (nucleotide excision repair)     GGR (global genome repair) factors      V22_00540 (ligA)    MMR (mismatch excision repair)     DNA ligase      V22_00540 (ligA)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       V22_00540 (ligA) BRITE hierarchy Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD PTCB-BRCT HHH BRCT_2 FlgT_N Auto_anti-p27 Motif Other DBs NCBI-ProteinID:  QDT62856 UniProt:  A0A517T3B4 LinkDB All DBs Position 57959..60007 Genome browser AA seq 682 aa AA seqDB search MPDSVLQQIEQLRTELDRHNRLYYIEARPEISDREFDHMMKQLEQLEQQHPEYASPNSPT QRVGGAPIEGFNTVEHRLPMLSIENIFQIESEDSHAQTLTRFDERIRRLLEDEPFTYTLE YKIDGVALAVIYENGELTTAVTRGDGIRGDDVTHNARTIRDLPLRIDPPETADAILEVRG EAYIPNSDFADLRAAQEARGDAVYANPRNLTAGSLKMLDPKLCAERKLRFFAHGVGYFSG YDFASHSDYLRTLGKLGFSVTPHVREAANIDEVKRIIEEMTTELHALDFEVDGLVLKVNS FAQREQLGNTSKSPRWLVAYKWERYEGVTKLEDVKFQVGRTGKVTPVAHLSPVEIAGTTV SRSSLHNSDEIERLGVRIGDTVVVEKAGKIIPHVVRVELTERTGDEKEIIFPQDCPVCET PLFKEADEVDHRCPNPNCPARLKGSVEFFASRAAMDVEGLGEKLIEQLLEQKLIGSLSDL YRLKDRREELLALERMGEKSVDNLLSGVEASKQQPLWRLLTGLNIRHVGQRNAQVLAEEF GTLDEILKQSEDDLAAVNEIGPIIAKSVKLFFDTETNQQLIEELRTLGLNFGKPIEKRSE EQAGDQPLADITLVVTGTLSRFTRDEIQELIRQNGGKASSSVSKKTDYLIAGEKAGSKRD KAESLGVKILSEDEFLELIDHR NT seq 2049 nt NT seq  +upstreamnt  +downstreamnt atgcccgacagtgtcctccagcagatcgaacagcttcgcacggagctcgatcgccataac cgcctctattacatcgaagcccggcccgaaatttcggaccgggaattcgatcacatgatg aagcagctcgaacaactcgagcagcagcatcccgaatatgcttcacccaacagcccgact caacgtgtgggcggcgcgccaatcgaaggcttcaatacagtcgagcatcgactgccaatg ctttcgattgaaaacatttttcagatcgagagtgaagactcccacgcgcagacactcacg cggttcgacgaacgcatccgcaggcttctcgaagacgagcctttcacctacacgctcgaa tataaaatcgatggcgttgccctcgccgtgatttacgaaaatggtgaactgacgaccgcc gttacgcggggtgatggtatccgcggcgatgacgtcacccacaacgcccgcactattcgc gatctaccgctgcgaatcgatccgcccgagacagcggacgctatcctcgaagtccgtggc gaagcctacattcccaattccgacttcgccgatttgagagccgcccaggaagcgcggggc gatgccgtatacgccaatccgcgtaacctcactgccggctcactgaagatgctcgacccg aagttgtgtgcagaacgcaaactgcgattcttcgcccacggcgtcggctacttcagcggg tacgacttcgcctcgcactctgattacctccgtacactcgggaagctcggcttttccgtc acgccgcatgtgcgcgaagcggcgaacatcgacgaggtcaaacgcatcatcgaagagatg accaccgaactgcatgccctcgattttgaagtcgatggtctcgtactgaaggtcaactcg ttcgctcagcgcgaacaactcggcaatacttccaaaagcccgcgctggctggtcgcctac aaatgggagcgctacgagggcgtaacgaagctggaagatgtgaagtttcaggtgggccgc accggcaaggtgacgccggttgcgcatctctcacccgtggaaatcgcaggcaccacagtc tcccgctcctcgttgcacaactccgatgaaatcgaacgactcggcgtacgcattggcgac acggtcgtcgtcgaaaaggccgggaagattattccacacgtcgtgcgtgtggaactgacc gagcgcacgggtgatgaaaaggagattatcttccctcaagattgcccggtttgtgagaca ccgctgttcaaagaagccgatgaagtcgatcaccgttgtcccaaccccaactgccccgca cggctgaagggatcagttgaattcttcgcctcccgcgcggcaatggatgtcgaagggctg ggcgaaaaactgatcgaacagctcctcgaacaaaaactgattggctcactttccgatttg tatcgactcaaagatcgccgggaggaactgctcgctctcgaacgcatgggtgaaaaatcg gtcgacaatctgctcagtggagttgaagcaagtaaacaacaaccactttggcgactgctg acaggtttaaacattcgccacgtcggccaacgcaacgcacaggttctcgcggaagagttc ggcacactcgatgaaattttgaaacagtcggaagacgacctcgccgcagtcaacgaaatc ggccccatcattgccaaatcggtgaagctgttcttcgataccgaaaccaaccaacaactt atcgaagaactacgaactctcggccttaactttggcaagccgattgaaaaacgctctgaa gaacaggcaggcgatcaaccactcgccgatataacactcgtcgtgaccggcacattaagc cgcttcacccgcgacgaaatccaagaactcatccgccagaacggcggcaaagcttccagc agcgtctccaagaaaacggactacctcatcgcgggcgaaaaagccggcagcaaacgtgat aaagctgaatcacttggcgtgaagatcttaagtgaggatgagtttctggaattgattgat caccgctga

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