Calycomorphotria hydatis: V22_18170
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Entry
V22_18170 CDS
T09810
Symbol
pdg
Name
(GenBank) Ultraviolet N-glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
chya
Calycomorphotria hydatis
Pathway
chya03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
chya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V22_18170 (pdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chya03400
]
V22_18170 (pdg)
Enzymes [BR:
chya01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
V22_18170 (pdg)
DNA repair and recombination proteins [BR:
chya03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
V22_18170 (pdg)
Prokaryotic type
V22_18170 (pdg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
QDT64582
UniProt:
A0A517T897
LinkDB
All DBs
Position
complement(2119098..2119742)
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AA seq
214 aa
AA seq
DB search
MDTQELKRHGSLVCRRLKKRYPDAECALHHDSPFQLLVATILSAQCTDERVNLTTPALFK
KYPTAEKLAAASQESVEKLIQSCGFFRSKANNLLGMAQAVVNEHDGEIPNDLESLVKLPG
VGRKTANVILGVTFRKATGVVVDTHVKRISNRLGLTTSQNPEIIERDLMRVLPKSQWIDY
SHRIIHHGRQICKARNPNCEECPLLSICPQVGIR
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
ttggatacccaggaactgaaacggcacggaagtctcgtctgtcggcgattgaagaagcga
tatcccgacgcggaatgcgcactgcatcacgactccccgttccagttgctcgtcgccacg
attctctccgcccaatgcactgatgagcgggtcaacttgacgacgccggcactcttcaag
aagtatcctaccgccgaaaagctagccgccgcgtctcaagaatcggtcgagaaactgatt
cagtcgtgcggcttctttcgctcgaaagccaataacctgctcggcatggcacaggcggtt
gtgaatgaacacgacggcgagattccgaacgacctggaatcgctcgtaaaactccccggc
gtgggacgcaaaacggcgaatgtcatcctcggtgtcacgttccgtaaagccacgggcgtg
gtggtcgacacgcacgtcaaacgcatcagcaatcgactgggactgacgaccagccagaat
cccgagatcattgaacgcgatctgatgcgcgtgctgccgaagtcacaatggatcgattat
tcccaccgaatcattcaccacggacgacaaatctgcaaagcacggaatccgaattgtgag
gaatgtcccctgctcagcatttgcccccaagtcggcatccggtaa
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