Citrobacter sp. TSA-1: HF677_011895
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Entry
HF677_011895 CDS
T09275
Symbol
ddpX
Name
(GenBank) D-alanyl-D-alanine dipeptidase
KO
K08641
zinc D-Ala-D-Ala dipeptidase [EC:
3.4.13.22
]
Organism
cib
Citrobacter sp. TSA-1
Pathway
cib01502
Vancomycin resistance
cib02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HF677_011895 (ddpX)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HF677_011895 (ddpX)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cib01002
]
HF677_011895 (ddpX)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cib01011
]
HF677_011895 (ddpX)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
cib01504
]
HF677_011895 (ddpX)
Enzymes [BR:
cib01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.13 Dipeptidases
3.4.13.22 D-Ala-D-Ala dipeptidase
HF677_011895 (ddpX)
Peptidases and inhibitors [BR:
cib01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
HF677_011895 (ddpX)
Peptidoglycan biosynthesis and degradation proteins [BR:
cib01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
HF677_011895 (ddpX)
Antimicrobial resistance genes [BR:
cib01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
HF677_011895 (ddpX)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M15
VanY
Peptidase_M15_4
Motif
Other DBs
NCBI-ProteinID:
QKE20333
LinkDB
All DBs
Position
complement(2494426..2495013)
Genome browser
AA seq
195 aa
AA seq
DB search
MSETPELVDLSVIFPSLHIDLKYATADNITGAPIYREARCLLHTEAVTALAKSISIAQLA
SLKLVVYDAYRPQQAQAVLWNACPDPQYVVDVAIGSNHSRGTAIDVTLMDDRGNLLDMGA
GFDEMHDRSHAWHPSVPPASQRNRLLLNAIMFGGGFVGITSEWWHFELPDAARYPLLDDQ
IDCYTVTPITTQHSL
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaccccagaactggtcgatctgtcggtgatattcccgtcgctgcatatcgat
cttaaatacgctacggcagacaacattaccggcgcccctatctaccgggaagctcgttgc
ctgttgcacaccgaggcggtcactgcgctggcgaaaagcatcagtattgcgcaactggcg
agcctgaaacttgtggtatacgacgcgtatcgcccgcagcaggcgcaggcggtgctgtgg
aatgcgtgtccagatcctcagtatgttgttgatgtggcgataggatccaatcacagccgc
gggacggccattgacgttacgctaatggacgatcgtggcaatcttctcgatatgggcgcg
ggctttgatgagatgcacgaccgttcccatgcctggcacccttctgttcctccggcttcg
cagcgcaaccgcctgctgctcaatgccattatgtttggcggcggttttgtcggtatcacc
agcgagtggtggcattttgaattacctgatgccgcccgctatccgctgcttgacgatcag
atagattgttacactgtcacacccataacaacacaacattccctttaa
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