Citrobacter sp. TSA-1: HF677_022220
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Entry
HF677_022220 CDS
T09275
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
cib
Citrobacter sp. TSA-1
Pathway
cib00270
Cysteine and methionine metabolism
cib00450
Selenocompound metabolism
cib00670
One carbon pool by folate
cib01100
Metabolic pathways
cib01110
Biosynthesis of secondary metabolites
cib01230
Biosynthesis of amino acids
cib04980
Cobalamin transport and metabolism
cib04981
Folate transport and metabolism
Module
cib_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
HF677_022220 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
HF677_022220 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HF677_022220 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HF677_022220 (metH)
04980 Cobalamin transport and metabolism
HF677_022220 (metH)
Enzymes [BR:
cib01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
HF677_022220 (metH)
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Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
QKE22249
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Position
complement(4674293..4677976)
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AA seq
1227 aa
AA seq
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MSSKVEQLRQQLNERILVLDGGMGTMIQGYRLSEEDFRGERFAAWPCDLKGNNDLLVLSK
PEVIAAIHNAYFEAGADIIETNTFNSTTIAMADYQMESLSAEINFAAAKLARAAADEWTT
RTPEKPRYVAGVLGPTNRTASISPDVNDPAYRNITFDQLVAAYRESTKALVEGGSDMILI
ETVFDTLNAKAAIFAVKTEFEALGVELPIMLSGTITDASGRTLSGQTTEAFYNSLRHADA
LTFGLNCALGPDELRQYVQELSRIAECYVTAHPNAGLPNAFGEYDLDADTMAAQIREWAQ
AGFLNVVGGCCGTTPEHIAAMSRAVEGLPPRRLPEIPVACRLSGLEPLNIGDDSLFVNVG
ERTNVTGSAKFKRLIKEEKYNEALDVARQQVESGAQIIDINMDEGMLDAEAAMVRFLNLI
AGEPDIARVPIMIDSSKWDVIEKGLKCIQGKGIVNSISMKEGVETFIHHAKLLRRYGAAV
VVMAFDEQGQADTRVRKIEICRRAYKILTEEVGFPPEDIIFDPNIFAVATGIDEHNNYAQ
DFIGACEDIKRELPHALISGGVSNVSFSFRGNDPVREAIHAVFLYYAIRNGMDMGIVNAG
QLAIYDDLPAELRDAVEDVILNRRDDGTERLLELAEKYRGSKTDDTANAQMAEWRSWDVK
KRLEYSLVKGITEFIEQDTEEARQQAARPIEVIEGPLMDGMNVVGDLFGEGKMFLPQVVK
SARVMKQAVAYLEPYIEASKEKGSSNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDL
GVMVPAEKILRTAREVNADLIGLSGLITPSLDEMVNVAKEMERQGFTIPLLIGGATTSKA
HTAVKIEQNYSGPTVYVQNASRTVGVVAALLSDTQRDDFVARTRKEYETVRIQHARKKPR
TPPVTLQAARDNDLAFDWENYTPPVAHRLGVQSVEASIETLRNYIDWTPFFMTWSLAGKY
PRILEDEVVGEEAKRLFKDANDMLDKLSAEKTLNPRGVVGLFPANRVGDDIEIYRDETRT
HVINVSHHLRQQTEKVGFANYCLSDFVAPKLSGKADYIGAFAVTGGLEEDALADAFEAQH
DDYNKIMVKAIADRLAEAFAEYLHERVRKVYWGYAANENLSNEELIRENYQGIRPAPGYP
ACPEHTEKATIWELLDVEAHTGMKLTESFAMWPGASVSGWYFSHPDSKYYAVAQIQRDQV
EDYAFRKGMSVAEVERWLAPNLGYDAD
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcaaagttgaacaattacgtcagcagttaaatgaacgtattctggtgctggac
ggcggtatgggcaccatgatccagggatatcgtctgagcgaagaggatttccgcggcgaa
cgctttgccgcctggccgtgcgatctgaaaggcaataacgacctgttggtgctcagcaaa
cctgaggtgatcgccgccatccataacgcctattttgaggcgggcgcggatatcatcgaa
accaacacctttaactccacgacgatcgccatggcggattaccagatggaatccctgtcg
gcggaaatcaactttgcagcagccaaactggcgcgcgcggcggcagacgaatggacgaca
cgcacaccggaaaaaccgcgctatgtcgcgggcgtgcttggcccaaccaaccgtacggcg
tctatctcgcctgacgtcaacgacccggcttaccgcaatattacctttgatcagctggtg
gccgcctaccgtgaatccaccaaagcgctggtggaaggtggcagcgacatgatcctgatt
gaaaccgtcttcgataccctgaacgccaaagccgctattttcgcggttaaaaccgagttt
gaagcgctgggcgttgagttgccgattatgctctccggcaccatcaccgatgcttccggg
cgtacgctctccggtcagacaaccgaagcgttctataactcactgcgccacgccgatgcg
ctgaccttcggtctgaactgcgccttaggcccggacgagttgcgccagtacgtgcaggag
ctgtcgcgcattgccgaatgctacgttaccgcgcacccgaacgccgggttgccgaacgcc
tttggcgaatacgatcttgatgcagacaccatggcggcgcaaatacgcgagtgggcgcaa
gcgggcttcctcaacgtggtcggcggctgctgcggcaccacgccggaacacatcgccgcg
atgagccgcgcagtggaaggcttgccgccgcgccgcttgccggaaatcccggtagcctgc
cgtctgtctggccttgaaccgttgaatattggcgacgatagcctgtttgtgaacgtcggc
gagcgtaccaacgtcaccggttcggcgaaatttaagcgactgatcaaagaagagaaatac
aacgaagcgctggatgtcgcccgtcagcaggtggaaagcggcgcacagattatcgatatc
aacatggatgaggggatgctcgacgccgaagcggcgatggtgcgttttctcaaccttatc
gccggtgagccggatatcgcccgcgtgccgattatgatcgactcctcaaaatgggacgtc
atcgaaaaagggctgaagtgcattcagggtaaaggcatcgttaactccatctctatgaaa
gagggggttgagacctttatccaccacgcgaagttgctgcgacgctacggtgccgcagtg
gtggtgatggcctttgacgagcaggggcaggccgacacccgtgtgcgtaaaattgagatt
tgccggcgggcgtacaaaattcttaccgaagaggtaggcttcccgccggaagacatcatc
ttcgacccgaacatctttgcggtcgcgaccgggattgatgagcacaacaactacgcccag
gactttatcggtgcctgtgaggacatcaaacgcgaactaccgcacgcgctgatctccggc
ggcgtctccaacgtgtcgttctccttccgtggtaacgacccggttcgtgaagccattcac
gcggtattcctttactacgccattcgcaacggcatggacatggggatcgtcaacgccgga
caactggcgatctacgacgacctgcccgccgagctgcgcgatgcggttgaagatgtgatc
ctcaaccgtcgtgacgatggcaccgagcgtctgctggagctggctgagaaatatcgcggt
agcaaaactgatgacactgccaatgcccagatggcggaatggcgcagttgggacgtgaaa
aagcgcctcgaatattcgctggtgaaaggcattaccgaatttattgagcaggatactgaa
gaagctcgccagcaggccgcgcgtccgatcgaggtgattgaagggccgctgatggacggg
atgaacgtggttggcgatctgtttggcgagggcaaaatgttcctgccgcaggtggtgaaa
tccgcccgcgtgatgaagcaggcggtggcctacctcgaaccgtatattgaggccagcaaa
gagaaaggctccagcaacggcaagatggtcattgctaccgtgaaaggcgatgtgcacgat
atcggcaaaaacatcgttggtgtggtgctgcaatgtaacaactacgaaatcgtcgatctt
ggcgtgatggtgccagcggagaaaatcctcagaacggcacgtgaagtgaatgccgatctg
attggtctttccgggctgattaccccgtcgctggacgaaatggtcaacgtggcgaaagag
atggagcgtcaggggttcactattccgttgctgattggcggcgcgaccacctcaaaagcg
cacacggcggtgaaaatagagcagaactacagtggtccgacggtttatgtgcagaacgcc
tcgcgtaccgttggcgtagtcgccgcactcctctctgacactcagcgcgatgactttgtc
gcccgtacgcgtaaagagtacgaaaccgtgcgtatccagcatgcgcgtaagaaaccgcgg
accccaccagtaacgttacaggctgcccgcgacaacgatcttgccttcgactgggaaaac
tacacgccgccagtggcgcaccgcctcggcgtacagagcgttgaagccagcatcgaaacg
ctgcgcaactacatcgactggacgccgttctttatgacctggtcgctggccgggaaatac
ccgcgcatcctcgaagatgaggtggtgggagaagaggcgaaacgtctgttcaaagacgcc
aatgacatgctggataaactcagcgctgagaagaccctgaatccgcgcggtgtggtgggc
ttgttcccggctaaccgcgtgggggacgacatcgagatttaccgtgacgagacgcgtacg
cacgtcatcaacgtcagtcatcacctgcgccagcagacggaaaaagtcggtttcgccaac
tactgcctgtctgactttgttgcgccgaaactgagtggcaaagcggattacatcggtgct
ttcgcagttaccggcggtctggaggaagatgcactggcggacgccttcgaagcccagcat
gacgactacaacaagatcatggtgaaagcgatcgccgaccgcctggcggaagcgttcgct
gaatatctgcacgagcgcgtgcgtaaagtctactggggctatgcggcgaatgagaacctc
agcaacgaggagctgatccgcgaaaactaccagggaattcgcccggcaccgggctatccg
gcttgcccggaacacaccgaaaaggccaccatctgggaactgctggatgtagaagcgcac
accggaatgaagctcaccgaatccttcgcgatgtggccaggtgcgtcggtttccggctgg
tatttcagtcatccagacagcaagtactacgccgtggcgcaaatccagcgcgatcaggtt
gaagattacgccttccgtaaaggcatgagcgtggcggaagtcgaacgttggttagcgcct
aatctgggctatgacgctgactga
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