Citrus x clementina (clementine): CICLE_v10014220mg
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Entry
CICLE_v10014220mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K15083
DNA repair protein RAD16
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cic03400
]
CICLE_v10014220mg
DNA repair and recombination proteins [BR:
cic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
CICLE_v10014220mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
ResIII
zf-C3HC4_4
zf-C3HC4_3
zf-RING_5
zf-RING_2
Prok-RING_4
zf-RING_10
zf-RING_Vps41
TPR_NUP160_120_M
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
18050387
NCBI-ProteinID:
XP_006447582
UniProt:
V4U4I0
LinkDB
All DBs
Position
Unknown
AA seq
883 aa
AA seq
DB search
MELRSRKTIGQSSGSGDAQGKQGNSGEGDSKGKGIIDLSDVSDDEIYVPSSDSDSFHSDD
ECKIYGDRHILKLGLSLETNNLTSSSVTGEFSIDLNAEPAAEREEVGPSNLVYCREQPAQ
AKGKKNESNKKKKTRGKKRQRTGSSLLWEIWEEEHERWIDMHEKDDVDLDQQNAFMTETA
EDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTI
GELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGLNRERSTKQ
FSEFDFVITTYSIIEADYRKHVMPPKQKCQYCGKSFYQKKLVVHLKYFCGPSAVRTEKQS
KQEKKKMKSSVYEGYPGKKNGKKSSVGGVQKPSGGKSPLHSLKWERIILDEAHFIKDRRS
NTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPYSYYFCKDCDCKVLDYSSAE
CPNCPHNSVRHFCWWNRYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADL
ALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAV
DHPYLVVYSKTASLRGETEADAEHVQQVCGLCNDLADDPVVTNCGHAFCKACLFDSSASK
FVAKCPTCSIPLTVDFTANEGAGNRTSKTTIKGFKSSSILNRIQLDEFQSSTKIEALREE
IRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDP
HCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIE
NTIEERILKLQEKKKLVFEGTVGGSADAFGKLTEADMRFLFVT
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggagctccgctctcgtaaaaccatcggtcaatcctccggtagcggcgatgcacaaggc
aagcaaggtaactctggtgaaggggacagtaagggaaaaggtattattgatctttctgat
gtttctgatgatgaaatttatgtgccgtcgtcggattctgatagtttccattcagatgat
gaatgcaaaatatatggagacagacatattttgaaattaggtcttagtctggagactaat
aatcttaccagcagttctgtaactggtgaattttccattgatttgaatgctgagcctgca
gcagaaagggaggaggtaggaccatcaaacctagtctattgtcgggaacagccagctcag
gcaaaagggaaaaaaaatgagtcaaataagaagaagaaaactcgtggaaagaaaagacag
aggacaggttcatcattgttgtgggaaatttgggaagaagagcatgagagatggattgac
atgcatgaaaaagatgatgttgatttggatcagcagaatgcttttatgactgagactgct
gaagatccaccagatttgatcacacctttgttaaggtaccaaaaggaatggttggcttgg
gctttaaaacaggaagaatctgcaatcagaggcggaatccttgcagatgagatgggaatg
ggaaagaccattcaagcaattgctctcgtacttgccaaaagggaaattcgtgggacaatc
ggtgaacttgatgcatcctcaagttcatcaacaggtttgctgggaatcaaagctacccta
gtaatttgtcctgtggctgctgtgactcagtgggtatctgagatcaatcggtttacttca
gtaggaagcaccaaagtactgatttatcatgggttgaacagagagagaagtactaagcag
ttctcagaatttgattttgttataacaacgtacagcattattgaggctgactacaggaaa
catgtgatgccacccaagcagaagtgccaatattgtgggaagtccttttatcagaagaag
cttgtagttcatctgaaatatttttgtgggccttctgctgtaaggactgagaaacagtct
aaacaagagaagaaaaagatgaaaagcagtgtttatgagggttacccagggaagaaaaat
gggaagaaatcatcagttggaggtgtacagaaaccatccggaggaaaatcacctttgcat
tctttgaagtgggagcggatcattttggatgaggcacatttcataaaagatagacgcagc
aatactgcaaaagcagttcttgctttggagtcttcgtacaagtgggctttaagtggcact
cctcttcagaaccgcgttggggaactctactccctggtgcgctttctacaaataactcca
tactcgtattacttttgtaaggactgtgactgcaaggttcttgattatagttcagcagaa
tgcccaaactgccctcataattccgttaggcatttttgttggtggaatagatatgttgct
actccgatacaaacacatggaaattcttatggtggaagaagagccatgatattgttaaag
cacaaagttctgagaagcgtaattctaagacgcactaaaaagggcagggctgctgatctt
gcccttcctccgagaattgtttctctaaggcgtgatagcctggatattagagaagcagat
tattacgagtcattgtatagtgaaagtcaagcacaatttaatacttatgtccaagcagga
actgtaatgaataactatgctcatatatttgaccttctcacacggttgcggcaggcagtt
gatcatccgtaccttgtggtatattctaaaactgcttctttaagaggtgaaacagaggca
gatgctgagcatgttcaacaagtatgtggtctatgcaatgatttggctgatgatcctgtg
gttaccaattgtggacatgccttttgtaaagcttgtttgtttgattcatctgcttcaaag
ttcgtagccaagtgcccaacatgttcaattccacttactgttgactttactgccaatgag
ggtgctggaaatcggactagtaaaacaaccattaaggggtttaaatcctcaagtattcta
aacaggatacaacttgatgaatttcagtcaagcacaaaaatagaggctctgagggaagaa
atcagattcatggttgaaagagatggctcagcgaaaggaattgttttcagccagttcaca
tcattcttggatctcataaattactcccttcataagtctggtgtaaactgtgttcagtta
gtgggaagtatgtccattcctgcaagagatgctgctatcaacagatttaccgaagaccct
cattgcaagattttcctcatgagcttgaaagctggaggtgttgcactcaatcttacggtt
gcatcacatgtatttttgatggatccttggtggaacccagctgtggagcagcaagcacaa
gatagaatccatcgcatagggcagtataagccaatcaggattgtgagatttctcattgag
aacacaattgaggaaaggattttgaaactgcaagagaagaagaaactagtatttgaaggg
actgtaggcggcagtgcagatgctttcgggaaattgacagaggcggacatgagatttctt
tttgtcacttga
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