KEGG   Citrus x clementina (clementine): CICLE_v10018477mg
Entry
CICLE_v10018477mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K23113  structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
cic  Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:cic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cic03036]
    CICLE_v10018477mg
   03400 DNA repair and recombination proteins [BR:cic03400]
    CICLE_v10018477mg
Chromosome and associated proteins [BR:cic03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    CICLE_v10018477mg
DNA repair and recombination proteins [BR:cic03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     CICLE_v10018477mg
SSDB
Motif
Pfam: HATPase_c_3 DivIC HATPase_c
Other DBs
NCBI-GeneID: 18047578
NCBI-ProteinID: XP_006441093
UniProt: V4T2B7
LinkDB
Position
Unknown
AA seq 1576 aa
MAAAESSLKRPTKRKWENAPYDRDEALPNKKSIRGQCRYKFKILFPNGATIDLLLIDPKH
KMAVTDFICLVKDEYFKSWMRHDSMKRKRKINWNGGNLYVEDANLNKISDTINFEMFEPS
KCHILKLYDGSGEIAKTFENMWDLTPDTDLLRELPEDYTFETALADLIDNSLQAVWTNAK
NERRLISVNIAEDKISVFDTGPGMDSTDENSIVKWGKMGASLHRASKAQGIGGKPPYLTP
FFGMFGYGGPIASMHLGRRALVSSKTKVSKEVYTLHLEKEALMRCSDAELTWRTNGGIRF
PSKDEIADSPHGSFTKVEIWEPKLKSLDVKPLGCKLKDIYFPYIQCDEISSTGKTTRPIE
FQVNGIDLAEVAGGEVAITNMHSCNGPDFILQLHFSLRQASATTNSPGSWPSKEANARLK
FVYFPVTEEGESIDIIMNKLISEGCVAAANYDTCSRVSIRRLGRLLPDVHWAWLPLMDLR
QRKGEKAHLLKKFCLRVKCFIDTDGGFNPTPSKTDLAHQNLYTIALKNFGAKTFKEEKDV
NVEIRRDGKLLTPIQLEKDYQEWLLNMHDHYDAEKDCGVDQPILLVGHKNIKPLVISTDV
ARVHKVVKKKGAMWKSGQKVKLLKGAYAGIHNNDVYATIEYFVIEGLQGDAGGEARIICR
PLAVPDEKGCVLAVNNGNASLHIGSSLSLPIGVIDSEKCVPVNKNVWDQQLEKYRQKSPS
TIELLKETQCQELEIDGVLPSSAIAGQNPPREIVAVVRPASFISSSASKNLVQKYIVKNS
SEMLMEVKFKCEDENLEDVVPLYTARVAPSSRKGYQGLYIFEVGCKFPKLFQNAGAYTFS
FHLTETSCKSCEKKVLVKGSSEVGKWKLLDTKERPELRVRVGSFLPPLSVACYDIYDNRI
PFESKPQFLVKIKPSKIIKVEDKLKWNLSPDKLTLNIQDILVASSKLDEIRPDYRATLVI
SSKDKPVSVSIPCRVTPGSLKNVAVHPQNLGILLPGSVIKMLKLEMFDAFYNNVKKGLEV
ELNVDGFCIEDQLGLRRKVDGYGCIDLSGLLKVKAGYGKNVSLSVLSDNGVIFKQDFQTE
KRELRVISGVPECCTVGSQLEDITFEIVDSKGAVDVTIHDDDKSGQSHTLTIRSDLINTE
NSIRYAFRQGRCTVPAISLPQNEGCFCFVATHSQYTELNTSIKVPIVRAPKLESDDIRTP
CSGGKVFLLEGPSPIKHVGNHMVPIMKIVNELESEVRNYGLCIGRHEKALKLLNDQKMEV
EEVLSKLQVSVEPYSLLTKEEIIRRIKSIYQSAASVICCSTKEFLYSKPRSNFMEDVVGP
VALIGTVCTNKLSRTLAEYLGEHQMLALVCRSFEAAFALEKYEQDGTIDRKCALHATAAA
LGKSIDGRYLVICLEGIRPYSGKFGSNDPQRKLALPAPTLPKGNIPAGFVGYAVNMVNLD
DHHMHIRTSAGNGLRETLLYRLFGKLQVYKTRKDMIEAHTCIRHGAVSLDGGILKEDGII
SLGCGNPTICFPIVRTRISTQSIEALKQIEEKKLELDGIMQSIQESNKALEKDLEKLKNS
EDKFNSFMDLWQTSLK
NT seq 4731 nt   +upstreamnt  +downstreamnt
atggcggcggcggaaagctcgttgaagcgaccgacgaaacggaaatgggagaatgcgccg
tatgatagagacgaggctctaccgaacaagaaatccatcagaggacagtgtcggtataaa
ttcaaaatattgtttccgaatggagctactatagatttacttctgatagatcccaagcat
aaaatggccgttacggactttatttgtttggtgaaagatgagtatttcaagtcttggatg
cgacacgattcaatgaagagaaaaaggaaaataaattggaatggtggaaatttatatgtg
gaagatgcaaatttgaataagataagtgatacaataaattttgagatgtttgagccctcc
aagtgccacattttaaagctatatgatgggtctggtgagatagccaagacttttgagaac
atgtgggatttgactccagatactgatttgctgagggagctgcctgaagactacactttt
gaaactgctcttgcggatttaattgataattccttgcaagcagtgtggacaaatgccaaa
aatgagcggagactcattagtgtgaatattgctgaggataagatttcagtttttgacact
ggcccaggaatggatagcactgatgaaaactctattgtgaagtggggaaagatgggtgcc
tcacttcacagagcttctaaagcacaaggaatagggggcaaacctccttatttaacgcca
ttttttggcatgtttggatatggaggacccatagcgtctatgcatttaggaaggcgtgcc
ttagtttcttcaaagacaaaagtttctaaggaagtttatactttgcatcttgagaaagag
gctttaatgaggtgttctgatgctgaactcacttggaggactaatggcggcatcaggttt
ccttcgaaagatgaaattgcggattcacctcatggaagttttacaaaggtggagatatgg
gagcctaaactaaaaagcttggacgtaaagccactcggatgcaaattaaaggatatctat
tttccctatattcagtgtgatgaaatttccagtacggggaagaccaccagaccaattgag
ttccaggttaatggcattgatttagctgaagttgctggtggggaggttgcaataaccaac
atgcactcttgcaatggtcctgattttatcttacaacttcatttttcccttaggcaagct
agtgctactaccaacagtcctggttcatggccatcaaaagaagcaaatgcacgcctcaag
tttgtttattttcctgttacagaggagggagagagcatcgacataattatgaataagctg
atttctgaaggatgtgtggctgctgcaaattatgatacctgtagtcgtgtatctattcgt
aggcttggtcgtctacttcctgatgttcactgggcatggcttcctttaatggatctgagg
cagaggaaaggagaaaaagcccacttgttgaagaaattttgcttgagagttaaatgtttc
attgacaccgatggtggtttcaatccaacaccttctaagactgatctagcacatcagaat
ctatatacgatagctctgaagaattttggtgctaagactttcaaggaagaaaaagatgtt
aatgttgaaattcgtagagatgggaaattgttaactcccattcaactggagaaggactat
caagagtggcttctgaatatgcatgatcattatgatgcagaaaaggattgtggagtggat
caaccaattcttcttgtcggccacaaaaacattaagccactagtcatttcaactgatgtt
gccagggtgcataaagtagtaaagaagaagggagcaatgtggaaatcaggccaaaaagtc
aaactactaaagggagcatatgctggaatccataataatgatgtgtacgcgacaatagaa
tattttgtaattgaaggattgcaaggggatgctggtggggaagctcgaattatatgcagg
ccactagctgtcccagatgagaaaggctgtgtccttgcagtgaataatgggaatgccagt
ttacatattggaagctccttatctctacctattggtgtcattgattctgaaaagtgtgta
cctgttaacaaaaatgtttgggatcagcaactggagaaatatcgccagaagtctccatct
acaattgagttgttgaaggagacgcaatgtcaggagttggagattgatggggttttacct
agcagtgctattgctggacaaaatcctcctagagaaattgtggctgttgttcgacctgcc
agttttatttcttctagtgcttcaaagaacttggttcagaagtatattgttaagaatagt
tcagagatgctcatggaagtcaagttcaaatgtgaagatgagaatcttgaagatgtagtc
cccctttacacagctcgcgtagcaccttcttctcggaaaggataccagggtttatatata
tttgaagtgggttgcaagttccctaaattatttcagaatgctggtgcatatacattttca
ttccatcttactgagacaagctgcaagagttgtgagaaaaaggtgctagttaagggatct
tctgaggttggaaaatggaaacttttggatactaaagagagaccagagttacgtgttaga
gttggttcattcttacctccgttatctgttgcgtgctatgacatttatgataatcggatt
ccgttcgagtctaagccacaatttttggtcaaaattaagccaagcaagattattaaggtt
gaagacaagttgaagtggaacctctcacctgataaattgacgctaaatattcaggacatt
ctggttgcaagctccaagttggatgagattcggccagattatagagctactttggtgata
tcttcaaaagataaaccagtgtccgtatcgattccatgtcgagtcactcctggatcttta
aagaatgtagcagtccatccacaaaatttgggtatcttgcttccgggctctgtgattaaa
atgctcaaattggagatgtttgatgctttttataataatgttaagaaaggcttggaggtt
gaacttaacgttgatggattttgtatcgaagatcaattgggcttaaggcgaaaggtggat
ggttatggatgcatcgatcttagtggcctattgaaagtaaaggctggttatggaaaaaat
gtgtcactttctgttttatctgataatggagttattttcaagcaagattttcaaactgag
aaaagagagctgagagtcatatcaggggtgcctgaatgctgtaccgttggttctcaactg
gaagatataactttcgaaattgttgattccaagggtgctgttgatgtaactattcatgat
gatgataaaagtgggcagtcccatactcttacaataaggtcagacttaattaacacagag
aattcaattcggtatgctttcaggcaaggtcgatgtactgtccctgctatttccctacct
cagaatgaggggtgcttttgctttgtagccacgcactctcaatatacagagctaaataca
agcatcaaggtacctattgtccgagcaccaaaactggagtctgatgatattagaactcca
tgttctggtggaaaggtttttctccttgagggtccatctccaatcaaacatgttggaaac
catatggtgcccatcatgaaaattgtgaatgaacttgagagcgaagtgcgcaactatggt
ttatgcatcgggcgtcacgagaaggcactgaaattgctcaatgatcagaagatggaagtt
gaggaagtgctatccaagttgcaagtttcagttgagccatactccttgttgacaaaagaa
gaaatcataagacggattaaaagtatatatcaatctgctgcctcagttatctgctgttct
accaaggagtttctgtacagcaaaccacggtcaaatttcatggaagatgtagttggtcca
gttgctctaattggtacagtctgcaccaacaagcttagcaggacattagcagagtacctg
ggggaacatcaaatgcttgctttggtgtgtagatcttttgaagcagcatttgcacttgag
aagtatgaacaagatggaactatcgatcgtaagtgtgcgctacatgccacagcagctgca
cttggaaagtctattgatggcagataccttgttatatgccttgagggtataaggccgtac
tctgggaagtttggaagcaatgacccacaaaggaagttagccttgccagcacctacctta
ccaaaaggaaatatccctgcaggttttgtgggatatgcagttaatatggttaacctagat
gaccaccacatgcacataagaacaagtgcggggaatggtcttcgggagactttattgtat
cgactctttggcaagcttcaagtgtataaaacccgtaaagacatgatagaggcgcatact
tgtataagacatggtgctgtatctctggatggtgggatcttgaaagaggacggtatcatc
tctcttggatgtgggaatcctacaatatgtttccccattgtcaggacccgaatatctact
caaagcatcgaagcattgaagcaaattgaagaaaagaagttggagttggatgggatcatg
cagtcgatacaggaatctaataaagcccttgagaaagatttggagaagcttaaaaatagt
gaagataaatttaattcgtttatggatctttggcaaaccagtcttaaatga

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