Citrus x clementina (clementine): CICLE_v10018477mg
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Entry
CICLE_v10018477mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10018477mg
03400 DNA repair and recombination proteins [BR:
cic03400
]
CICLE_v10018477mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
CICLE_v10018477mg
DNA repair and recombination proteins [BR:
cic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
CICLE_v10018477mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HATPase_c_3
DivIC
HATPase_c
Motif
Other DBs
NCBI-GeneID:
18047578
NCBI-ProteinID:
XP_006441093
UniProt:
V4T2B7
LinkDB
All DBs
Position
Unknown
AA seq
1576 aa
AA seq
DB search
MAAAESSLKRPTKRKWENAPYDRDEALPNKKSIRGQCRYKFKILFPNGATIDLLLIDPKH
KMAVTDFICLVKDEYFKSWMRHDSMKRKRKINWNGGNLYVEDANLNKISDTINFEMFEPS
KCHILKLYDGSGEIAKTFENMWDLTPDTDLLRELPEDYTFETALADLIDNSLQAVWTNAK
NERRLISVNIAEDKISVFDTGPGMDSTDENSIVKWGKMGASLHRASKAQGIGGKPPYLTP
FFGMFGYGGPIASMHLGRRALVSSKTKVSKEVYTLHLEKEALMRCSDAELTWRTNGGIRF
PSKDEIADSPHGSFTKVEIWEPKLKSLDVKPLGCKLKDIYFPYIQCDEISSTGKTTRPIE
FQVNGIDLAEVAGGEVAITNMHSCNGPDFILQLHFSLRQASATTNSPGSWPSKEANARLK
FVYFPVTEEGESIDIIMNKLISEGCVAAANYDTCSRVSIRRLGRLLPDVHWAWLPLMDLR
QRKGEKAHLLKKFCLRVKCFIDTDGGFNPTPSKTDLAHQNLYTIALKNFGAKTFKEEKDV
NVEIRRDGKLLTPIQLEKDYQEWLLNMHDHYDAEKDCGVDQPILLVGHKNIKPLVISTDV
ARVHKVVKKKGAMWKSGQKVKLLKGAYAGIHNNDVYATIEYFVIEGLQGDAGGEARIICR
PLAVPDEKGCVLAVNNGNASLHIGSSLSLPIGVIDSEKCVPVNKNVWDQQLEKYRQKSPS
TIELLKETQCQELEIDGVLPSSAIAGQNPPREIVAVVRPASFISSSASKNLVQKYIVKNS
SEMLMEVKFKCEDENLEDVVPLYTARVAPSSRKGYQGLYIFEVGCKFPKLFQNAGAYTFS
FHLTETSCKSCEKKVLVKGSSEVGKWKLLDTKERPELRVRVGSFLPPLSVACYDIYDNRI
PFESKPQFLVKIKPSKIIKVEDKLKWNLSPDKLTLNIQDILVASSKLDEIRPDYRATLVI
SSKDKPVSVSIPCRVTPGSLKNVAVHPQNLGILLPGSVIKMLKLEMFDAFYNNVKKGLEV
ELNVDGFCIEDQLGLRRKVDGYGCIDLSGLLKVKAGYGKNVSLSVLSDNGVIFKQDFQTE
KRELRVISGVPECCTVGSQLEDITFEIVDSKGAVDVTIHDDDKSGQSHTLTIRSDLINTE
NSIRYAFRQGRCTVPAISLPQNEGCFCFVATHSQYTELNTSIKVPIVRAPKLESDDIRTP
CSGGKVFLLEGPSPIKHVGNHMVPIMKIVNELESEVRNYGLCIGRHEKALKLLNDQKMEV
EEVLSKLQVSVEPYSLLTKEEIIRRIKSIYQSAASVICCSTKEFLYSKPRSNFMEDVVGP
VALIGTVCTNKLSRTLAEYLGEHQMLALVCRSFEAAFALEKYEQDGTIDRKCALHATAAA
LGKSIDGRYLVICLEGIRPYSGKFGSNDPQRKLALPAPTLPKGNIPAGFVGYAVNMVNLD
DHHMHIRTSAGNGLRETLLYRLFGKLQVYKTRKDMIEAHTCIRHGAVSLDGGILKEDGII
SLGCGNPTICFPIVRTRISTQSIEALKQIEEKKLELDGIMQSIQESNKALEKDLEKLKNS
EDKFNSFMDLWQTSLK
NT seq
4731 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggaaagctcgttgaagcgaccgacgaaacggaaatgggagaatgcgccg
tatgatagagacgaggctctaccgaacaagaaatccatcagaggacagtgtcggtataaa
ttcaaaatattgtttccgaatggagctactatagatttacttctgatagatcccaagcat
aaaatggccgttacggactttatttgtttggtgaaagatgagtatttcaagtcttggatg
cgacacgattcaatgaagagaaaaaggaaaataaattggaatggtggaaatttatatgtg
gaagatgcaaatttgaataagataagtgatacaataaattttgagatgtttgagccctcc
aagtgccacattttaaagctatatgatgggtctggtgagatagccaagacttttgagaac
atgtgggatttgactccagatactgatttgctgagggagctgcctgaagactacactttt
gaaactgctcttgcggatttaattgataattccttgcaagcagtgtggacaaatgccaaa
aatgagcggagactcattagtgtgaatattgctgaggataagatttcagtttttgacact
ggcccaggaatggatagcactgatgaaaactctattgtgaagtggggaaagatgggtgcc
tcacttcacagagcttctaaagcacaaggaatagggggcaaacctccttatttaacgcca
ttttttggcatgtttggatatggaggacccatagcgtctatgcatttaggaaggcgtgcc
ttagtttcttcaaagacaaaagtttctaaggaagtttatactttgcatcttgagaaagag
gctttaatgaggtgttctgatgctgaactcacttggaggactaatggcggcatcaggttt
ccttcgaaagatgaaattgcggattcacctcatggaagttttacaaaggtggagatatgg
gagcctaaactaaaaagcttggacgtaaagccactcggatgcaaattaaaggatatctat
tttccctatattcagtgtgatgaaatttccagtacggggaagaccaccagaccaattgag
ttccaggttaatggcattgatttagctgaagttgctggtggggaggttgcaataaccaac
atgcactcttgcaatggtcctgattttatcttacaacttcatttttcccttaggcaagct
agtgctactaccaacagtcctggttcatggccatcaaaagaagcaaatgcacgcctcaag
tttgtttattttcctgttacagaggagggagagagcatcgacataattatgaataagctg
atttctgaaggatgtgtggctgctgcaaattatgatacctgtagtcgtgtatctattcgt
aggcttggtcgtctacttcctgatgttcactgggcatggcttcctttaatggatctgagg
cagaggaaaggagaaaaagcccacttgttgaagaaattttgcttgagagttaaatgtttc
attgacaccgatggtggtttcaatccaacaccttctaagactgatctagcacatcagaat
ctatatacgatagctctgaagaattttggtgctaagactttcaaggaagaaaaagatgtt
aatgttgaaattcgtagagatgggaaattgttaactcccattcaactggagaaggactat
caagagtggcttctgaatatgcatgatcattatgatgcagaaaaggattgtggagtggat
caaccaattcttcttgtcggccacaaaaacattaagccactagtcatttcaactgatgtt
gccagggtgcataaagtagtaaagaagaagggagcaatgtggaaatcaggccaaaaagtc
aaactactaaagggagcatatgctggaatccataataatgatgtgtacgcgacaatagaa
tattttgtaattgaaggattgcaaggggatgctggtggggaagctcgaattatatgcagg
ccactagctgtcccagatgagaaaggctgtgtccttgcagtgaataatgggaatgccagt
ttacatattggaagctccttatctctacctattggtgtcattgattctgaaaagtgtgta
cctgttaacaaaaatgtttgggatcagcaactggagaaatatcgccagaagtctccatct
acaattgagttgttgaaggagacgcaatgtcaggagttggagattgatggggttttacct
agcagtgctattgctggacaaaatcctcctagagaaattgtggctgttgttcgacctgcc
agttttatttcttctagtgcttcaaagaacttggttcagaagtatattgttaagaatagt
tcagagatgctcatggaagtcaagttcaaatgtgaagatgagaatcttgaagatgtagtc
cccctttacacagctcgcgtagcaccttcttctcggaaaggataccagggtttatatata
tttgaagtgggttgcaagttccctaaattatttcagaatgctggtgcatatacattttca
ttccatcttactgagacaagctgcaagagttgtgagaaaaaggtgctagttaagggatct
tctgaggttggaaaatggaaacttttggatactaaagagagaccagagttacgtgttaga
gttggttcattcttacctccgttatctgttgcgtgctatgacatttatgataatcggatt
ccgttcgagtctaagccacaatttttggtcaaaattaagccaagcaagattattaaggtt
gaagacaagttgaagtggaacctctcacctgataaattgacgctaaatattcaggacatt
ctggttgcaagctccaagttggatgagattcggccagattatagagctactttggtgata
tcttcaaaagataaaccagtgtccgtatcgattccatgtcgagtcactcctggatcttta
aagaatgtagcagtccatccacaaaatttgggtatcttgcttccgggctctgtgattaaa
atgctcaaattggagatgtttgatgctttttataataatgttaagaaaggcttggaggtt
gaacttaacgttgatggattttgtatcgaagatcaattgggcttaaggcgaaaggtggat
ggttatggatgcatcgatcttagtggcctattgaaagtaaaggctggttatggaaaaaat
gtgtcactttctgttttatctgataatggagttattttcaagcaagattttcaaactgag
aaaagagagctgagagtcatatcaggggtgcctgaatgctgtaccgttggttctcaactg
gaagatataactttcgaaattgttgattccaagggtgctgttgatgtaactattcatgat
gatgataaaagtgggcagtcccatactcttacaataaggtcagacttaattaacacagag
aattcaattcggtatgctttcaggcaaggtcgatgtactgtccctgctatttccctacct
cagaatgaggggtgcttttgctttgtagccacgcactctcaatatacagagctaaataca
agcatcaaggtacctattgtccgagcaccaaaactggagtctgatgatattagaactcca
tgttctggtggaaaggtttttctccttgagggtccatctccaatcaaacatgttggaaac
catatggtgcccatcatgaaaattgtgaatgaacttgagagcgaagtgcgcaactatggt
ttatgcatcgggcgtcacgagaaggcactgaaattgctcaatgatcagaagatggaagtt
gaggaagtgctatccaagttgcaagtttcagttgagccatactccttgttgacaaaagaa
gaaatcataagacggattaaaagtatatatcaatctgctgcctcagttatctgctgttct
accaaggagtttctgtacagcaaaccacggtcaaatttcatggaagatgtagttggtcca
gttgctctaattggtacagtctgcaccaacaagcttagcaggacattagcagagtacctg
ggggaacatcaaatgcttgctttggtgtgtagatcttttgaagcagcatttgcacttgag
aagtatgaacaagatggaactatcgatcgtaagtgtgcgctacatgccacagcagctgca
cttggaaagtctattgatggcagataccttgttatatgccttgagggtataaggccgtac
tctgggaagtttggaagcaatgacccacaaaggaagttagccttgccagcacctacctta
ccaaaaggaaatatccctgcaggttttgtgggatatgcagttaatatggttaacctagat
gaccaccacatgcacataagaacaagtgcggggaatggtcttcgggagactttattgtat
cgactctttggcaagcttcaagtgtataaaacccgtaaagacatgatagaggcgcatact
tgtataagacatggtgctgtatctctggatggtgggatcttgaaagaggacggtatcatc
tctcttggatgtgggaatcctacaatatgtttccccattgtcaggacccgaatatctact
caaagcatcgaagcattgaagcaaattgaagaaaagaagttggagttggatgggatcatg
cagtcgatacaggaatctaataaagcccttgagaaagatttggagaagcttaaaaatagt
gaagataaatttaattcgtttatggatctttggcaaaccagtcttaaatga
DBGET
integrated database retrieval system