Citrus x clementina (clementine): CICLE_v10019786mg
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Entry
CICLE_v10019786mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K12126
phytochrome-interacting factor 3
Organism
cic
Citrus x clementina (clementine)
Pathway
cic04075
Plant hormone signal transduction
cic04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
CICLE_v10019786mg
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
CICLE_v10019786mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cic03000
]
CICLE_v10019786mg
Transcription factors [BR:
cic03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
CICLE_v10019786mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
18047007
NCBI-ProteinID:
XP_006444629
UniProt:
V4VWZ3
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MSNQEFLELVWEDGQLRMRGSSKRTQKSTSSCIDHASRSSNARLENGGNTDTFPPKNENQ
HESLLEISYKSHFNAFSEHATGYNIDYDDKLRKDSQVVPVHETTPTPTGNRQSRDSTPLK
RPRVKYSPNLLSLDVLKREPEKKREQPVNFSLFLRSPALRTSSRRGFSRAEPEKVQNKPR
LLSPAANGSASVKGFQNQLNSADTNAELLQPVPVTVPDVQSEADYSRTSSLPAENTVKRK
LDAGKCIEPPVPSSSLCSLGASNNNPACTTFNLKRRYEDTEVSACPCDQYEKKLERKAVT
VRGSKSNRKKRTPEVHKRYERKRRDKINKKMRALQELIPNCNKVDKASVLEEAIDYLKTL
QFQVMMMSMGTGVCMPSMMLPTGIIGMQQMHAVAPQMSHFPPMGIGMDGRMQMGAGCNPA
QFLMPPIPGATAVPGIQMPGFPGQPLPMSMLRTPLGLMHKTNPVAGVSRAAASMEVKDSA
PLTNPGDSNQNVEINKRNVEHHKIRPSA
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatcaagaatttttggagcttgtgtgggaagatggtcaacttcgcatgcgaggt
tcttcaaagagaactcaaaagagcacttcctcgtgcattgatcatgcttctcgctcgtcc
aatgctcgtttggaaaatgggggaaatacagacacctttcctccaaagaatgagaaccaa
catgaatcgctgcttgaaatatcgtataaaagccattttaatgcattttcggaacatgct
acaggttataatattgattatgatgataagctacgcaaggactctcaagttgttccggtg
catgaaactaccccaactccaacgggtaaccgtcagtctcgtgattcaactccacttaaa
aggccacgagttaaatacagcccgaatctactttcattggatgtattgaaaagagaacct
gaaaagaaaagagagcagccagttaacttttctcttttcttgagatctccagcgctgcga
acaagcagtaggagaggtttctcaagagctgagcctgagaaggtgcaaaataagcctcga
ctgctatcgccagcagctaatggttcagcgagtgttaagggatttcagaaccagctgaat
tctgcagacacaaacgcggagctgttacaaccagtcccagtcacagtccccgatgtacaa
tcggaagctgattacagccgaacctcgagcttaccggctgagaatactgtcaaacgaaag
ctggatgctggaaaatgtatagaaccaccagttccgtcttcttccttatgctcacttgga
gcttcaaataataatcctgcgtgtactacttttaatttgaagaggagatatgaagatacc
gaggtatccgcttgtccttgtgaccaatatgagaagaaactggagagaaaagcagtgact
gttcggggcagcaaaagtaaccggaaaaaacgaactcctgaagttcataagcgatatgaa
cggaagcgaagagataagatcaacaagaaaatgcgtgcattacaggagctcataccaaat
tgcaataaggtggacaaagcttcggtgcttgaggaggccattgattacttaaagactctt
cagtttcaagtaatgatgatgtcaatgggaacaggggtttgtatgccttcgatgatgcta
cctacaggaataataggaatgcaacaaatgcatgcagttgcaccgcagatgagtcatttc
cctcccatgggaattggaatggacgggagaatgcaaatgggtgctggctgcaacccagca
cagttcctaatgccacccattccaggagccactgctgtgcctggaatccagatgcctggc
tttcctggacagccgctgcccatgtccatgttacgcacaccattaggactaatgcacaaa
acaaatccagttgccggcgtctctcgagctgctgcttcaatggaagtcaaggactctgca
ccgctcacaaatcccggggattccaatcagaacgtagaaattaacaaaagaaacgttgag
caccacaagattcgaccttctgcttag
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