Citrus x clementina (clementine): CICLE_v10024812mg
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Entry
CICLE_v10024812mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K13141
integrator complex subunit 4
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cic03041
]
CICLE_v10024812mg
Spliceosome [BR:
cic03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
CICLE_v10024812mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT
HEAT_2
PDS5
HEAT_EZ
MMS19_N
POLO_box
Adaptin_N
DUF3386
Motif
Other DBs
NCBI-GeneID:
18037298
NCBI-ProteinID:
XP_006428129
UniProt:
V4UPE2
LinkDB
All DBs
Position
Unknown
AA seq
944 aa
AA seq
DB search
MEEQIAQNCEQSLSVSKRHSLRALSSIRSLINNPNTSNSTLSSLLETLTRSLQLTDSDSL
TRHHELTLLAGLSLRHPHFSPLISNSLRSNSLLFSSSSPRLAAAAAAALAVISDHTVDDR
FFVSLCFASSVSVRLWLLRNAERFNVRPHLLFTVCLGLTKDPYPYVREAALNGLVCLLKH
VVFEDVDLIQGCCCRAVELLRDHEDCVRCAAVRVVSEWGKMLIACIDEKNRIDCSDVVFI
QLCSMIRDMRMEVRVEAFNALGKVGMISEIVLLQTLCKKVLGATKEKKFHSLGAAECFEI
SASAAAGTFVHGFEDEFYEVRKSACSSLGSLVILSEKFAGEALNLLVDMLNDDSVTVRLQ
ALETMHIMVTCEHLNLEDKHMHMFLGTLVDNCELVRCAARKILKLVKTPKLEFFRLFIDG
LLENLKIYPQDEADVFSVLFFIGRSHGNFAACIIKEVCQEIEPDSDDKLGFDNARVAAFL
VLAISVPLSCEQNVRSIPPQIFSYAVTLLGRISYALSDVMNQHSLLAYLSLCSRLSNFSE
ANFKGEDAPLHEAKSDDPNCPTEVSIGADIHVQKSGDEDSKSRSWIHGKLKETVTSRCQL
EEEDEIWKALNLVLAKVRNVWSLVQSGFSKEALRILRACKEEVLTFKAESRGFDGALLFS
LQYFKVLKLLTKVWEQFVPAKNIHHYEQGELEFLLGKLDRSLRELGCRFLGLSKEEELHV
LELMLISCLLRLSKFEICFYYTTMRNLSSTISHLEFLHQQGSTEPSNFVTAVKKSLFEIN
ISTSHTSYRPFLFNQLLNSFSLSQLVFHGRLEQVHAELGVPDNSSENPVIFVSGLPVSIP
FEITLYHISSVNRLWLRMTMSDETTQFVFLDSNLLGGCKDAKKFTYVAPFYRTPKAASFT
LSVCIGMECLFEDIHSVKGNGGPKRALAYLCNEKEVYFSRVSRG
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacaaattgcacaaaattgcgaacagtcgctctctgtctcaaaacgacacagt
ttaagagcactatcttcaattcgctccctaataaataatcctaacacttccaattcaact
ctctcttcgctcctcgaaaccctaactcgctctctccaacttacggattctgactcactc
actcgccaccatgagctcactctcctcgccggtctctcactccgtcaccctcacttctct
cctctcatatccaactcgctccgttccaactctctcctcttctcctcctcttcccctcgt
ctcgccgccgccgccgccgccgcactcgcagttatctccgaccacaccgtcgacgatcgc
ttcttcgtttcgctctgtttcgcttcttccgtgtccgtacggctttggttgcttagaaac
gccgagaggtttaacgtacggccgcatttgttgttcaccgtgtgtttagggttgacgaag
gatccgtatccgtacgtaagagaagctgctttgaatggcttggtttgtttgttaaaacat
gtcgtttttgaggacgttgatttgattcaaggatgttgttgccgtgccgttgagcttcta
cgcgatcacgaagattgcgttaggtgtgccgccgttcgcgtggtcagtgaatgggggaaa
atgcttatagcatgcatcgacgagaagaatcgaatagattgttcagacgtagtatttatc
cagctatgttcaatgataagagatatgagaatggaggtcagagttgaagcttttaatgct
cttgggaaagtaggaatgatatctgagattgtcttattgcaaactctatgtaagaaggtt
ttaggggccacgaaagagaagaaatttcatagtctgggtgctgcagagtgcttcgaaatt
tcagcatcggctgctgctgggacttttgtgcatgggtttgaggatgaattttacgaggtg
cgtaaatctgcttgttcttccttgggttcacttgtaatcctttctgaaaaatttgctgga
gaagctttaaaccttctggtggacatgctgaatgatgattcagtgactgtccggctacaa
gctttggaaacaatgcatattatggtaacctgtgaacatctaaatttggaagacaaacac
atgcacatgtttcttggtactctagttgacaactgtgaacttgtgagatgtgcagcaaga
aaaatactaaaattagtgaagacacccaaattggagttttttagactatttattgatggg
ctgcttgaaaacttgaagatttatccacaggacgaagctgatgttttttctgttttgttt
tttattggtcgaagtcatgggaactttgcagcgtgcatcatcaaggaggtttgtcaagag
atagagccagattctgatgacaaacttggctttgataatgctagagtagctgcatttctg
gtgttggccatctcagttcccctctcatgcgaacaaaatgtccgcagcattccgcctcag
atattttcatatgcagttacattgctggggaggatttcttatgctttaagtgatgttatg
aaccaacattccctcttggcctacttgtctttatgcagtagattgtccaatttttctgag
gccaatttcaaaggggaagacgctcccttgcatgaagctaaaagtgatgacccaaattgc
cccactgaggttagtattggggcagatattcacgtgcagaaaagcggtgatgaagactct
aaaagtcgatcttggatacatggcaagctgaaggagacagtgacatcacgttgccagctg
gaagaggaggatgagatatggaaggctttgaatcttgtgcttgcaaaggtcaggaatgtc
tggtcattggtacaatctggattctcaaaggaggctttgcggatattgagggcttgcaag
gaagaagtgttaacatttaaagctgaatcccgtggatttgatggtgcgttattatttagc
ttgcaatatttcaaggtactgaaactgcttactaaggtctgggagcaatttgtgcccgct
aaaaatattcatcattatgagcagggagaattggagtttctactaggaaaattggatagg
agtctgagagaactcgggtgtaggtttcttggattgtctaaagaagaggaattgcatgtc
ttagagctgatgctgatctcttgtttattgagattgtccaaattcgaaatctgcttctac
tataccaccatgaggaacctatcttctacaatttcacatttagaatttctccatcagcaa
ggatccactgaaccatcgaatttcgtaactgcagtgaagaaatcattatttgagatcaac
atttctactagtcatacttcctacaggccatttctgttcaatcaattactcaattccttc
tctctgagtcaacttgtgtttcatggaagacttgagcaggtacatgcagaattgggtgtt
cctgataatagttctgaaaatcctgttatttttgtctcaggactcccagtttctataccc
tttgagatcactttgtatcatatctcgagtgtgaataggttgtggctcaggatgactatg
agtgatgagaccactcaatttgtatttctagattcgaacttacttggtggctgcaaagat
gccaagaaatttacatacgttgcacctttttatagaacaccaaaggcagcatctttcact
ctgagcgtttgtattggtatggaatgtttatttgaagatatacattcagtcaagggcaat
ggaggaccgaaacgtgccctagcatatctttgcaatgaaaaagaagtttacttttccagg
gtttctagaggatga
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