KEGG   Citrus x clementina (clementine): CICLE_v10026815mg
Entry
CICLE_v10026815mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
cic  Citrus x clementina (clementine)
Pathway
cic03420  Nucleotide excision repair
cic04120  Ubiquitin mediated proteolysis
cic04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cic00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    CICLE_v10026815mg
   04120 Ubiquitin mediated proteolysis
    CICLE_v10026815mg
  09124 Replication and repair
   03420 Nucleotide excision repair
    CICLE_v10026815mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cic04121]
    CICLE_v10026815mg
   03400 DNA repair and recombination proteins [BR:cic03400]
    CICLE_v10026815mg
Enzymes [BR:cic01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     CICLE_v10026815mg
Ubiquitin system [BR:cic04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   CICLE_v10026815mg
  Multi subunit type E3
   SCF complex
    Ring finger protein
     CICLE_v10026815mg
   Cul2 complex
     CICLE_v10026815mg
   Cul3 complex
     CICLE_v10026815mg
   Cul4 complex
     CICLE_v10026815mg
   Cul7 complex
     CICLE_v10026815mg
   Cul8 complex
     CICLE_v10026815mg
   Cul9 complex
     CICLE_v10026815mg
DNA repair and recombination proteins [BR:cic03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      CICLE_v10026815mg
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      CICLE_v10026815mg
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-RING_16
Other DBs
NCBI-GeneID: 18036432
NCBI-ProteinID: XP_006426683
UniProt: V4RY64
LinkDB
Position
Unknown
AA seq 107 aa
MSSHNDACPCPSNSNKKHKPFEIKKWNPVAFWQWDIVVDTCAICRNHIMELCIECQANQA
SVTSQDCTAAWGLCNHAFHFHCISRWLKTRQACPLDNSVWEYQKYGH
NT seq 324 nt   +upstreamnt  +downstreamnt
atgtcgagccataacgatgcatgtccgtgcccttcaaattcaaacaagaaacacaaaccg
ttcgaaatcaagaagtggaatccggttgctttctggcagtgggatatcgttgtggacact
tgtgctatttgcaggaaccacatcatggaactttgcatagagtgtcaagcgaatcaagcc
agcgttaccagccaggactgcacggctgcttggggtttgtgcaatcacgcctttcacttc
cactgcatcagccgatggctcaagactcgccaagcgtgccctttagataacagtgtgtgg
gaataccaaaagtatgggcactag

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