KEGG   Celeribacter indicus: P73_2603
Entry
P73_2603          CDS       T03575                                 
Name
(GenBank) NAD-dependent DNA ligase
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
cid  Celeribacter indicus
Pathway
cid03030  DNA replication
cid03410  Base excision repair
cid03420  Nucleotide excision repair
cid03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cid00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    P73_2603
   03410 Base excision repair
    P73_2603
   03420 Nucleotide excision repair
    P73_2603
   03430 Mismatch repair
    P73_2603
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cid03032]
    P73_2603
   03400 DNA repair and recombination proteins [BR:cid03400]
    P73_2603
Enzymes [BR:cid01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     P73_2603
DNA replication proteins [BR:cid03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     P73_2603
DNA repair and recombination proteins [BR:cid03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     P73_2603
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     P73_2603
   MMR (mismatch excision repair)
    DNA ligase
     P73_2603
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      P73_2603
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 PTCB-BRCT Nlig-Ia
Other DBs
NCBI-ProteinID: AJE47318
UniProt: A0A0B5DV80
LinkDB
Position
complement(2602480..2604594)
AA seq 704 aa
MSQLQAVEAMSEDEARAELARLADLLAKANAAYHAEDAPVMSDADFDALKRRNAAIEVRF
PELKRADSPTEQVGAAPSEGFGKITHAVRMMSLANAFDDDDLREFDASVRKYLGLSEEIA
YTAEPKIDGLSLSIRYEGGLLVHAATRGDGEVGENVTANALTIDDIPARLEDAPEVIEVR
GEVYMSHADFEALNARQAGQGGKTFANPRNAAAGSLRQLDPEITRARPLKFFAYAWGELS
APLGATQMEAIARLAAFGFPTNPLTERFTGLSRLIAHYHDIEARRATLGYDIDGVVYKVD
DLALQRRLGFRSTTPRWAIAHKFPAELAWTRLEAIDIQVGRTGALSPVARLAPVTVGGVV
VSNATLHNEDYIAGRDSRGEEIRGGKDIRVGDWVQVYRAGDVIPKVADVDLARRTSDAVP
YAFPTTCPECGSAAIREEGDAVRRCTGGLICPAQAVEKLKHFVSRAAFDIEGLGAKQVEQ
FYRDGWIREPADIFELREKFGPGNLSQLKNREGWGEKSAQNLFAAIDTRREIPLARLIFA
LGIRHVGETSAHLLATHYGTWTEFEAAMRDAEVGDGQLWSDLLSIDGVGEVMATSLVTAF
HQEAERASIDRLVRHLTVLEAERPKSDSPVSGKTVVFTGTLEKMTRSEAKARAEALGAKV
AGSVSAKTDIVVAGPGAGSKEKKARDLGLEILDEDGWLALIGDA
NT seq 2115 nt   +upstreamnt  +downstreamnt
atgtcgcagttgcaggccgtcgaggcgatgagcgaggacgaggcgcgcgccgaactggcg
cgcctcgcggacctgctcgccaaggcgaacgcggcctatcacgccgaggacgcgccggtc
atgtcggatgcggatttcgacgcgctgaagcgccggaacgccgcgatcgaggtccgcttt
cccgaactcaagcgcgccgacagcccgacggaacaggtcggcgcggcgccctcggaaggc
ttcggaaagatcacccacgccgtgcggatgatgtcgctcgcgaacgccttcgacgacgac
gacctgcgcgaattcgacgcctccgtgcgcaagtatctcggcctgtcggaggagatcgcc
tataccgccgagccaaagatcgacgggctgtcgctgtcgatccgctacgaggggggcctg
ctcgtccatgcggcgacgcgcggggacggcgaggtcggtgaaaacgtcaccgccaatgcg
ctgaccatcgacgacattcccgcccggctcgaggacgcgccggaggtcatcgaggtgcgc
ggcgaggtctacatgagccatgcggatttcgaggcgctgaacgcacggcaggccgggcag
ggcggcaagaccttcgccaacccgcgcaacgcggcggccggatcgctgcgccagctcgat
cccgaaatcacccgcgcgcggccgctgaaattcttcgcctatgcctggggcgaactctcc
gctccgctgggcgcgacgcagatggaggcgatcgcgcgcctcgccgcgttcggatttccg
accaatccgctcaccgagcggttcaccggcctgtcccgcctgatcgcgcattaccacgac
atcgaggcgcggcgggcgacgctcggctatgacatcgacggggtggtctacaaggtcgat
gatctcgcgctccagcgccggctcggcttccgctcgacgacgccgcgttgggccatcgcg
cacaagtttcccgcagagctcgcctggacccggctcgaggcgatcgacatccaggtcggg
cgcaccggcgcgctctcgcccgtggcccgcctcgcccccgtcaccgtcggcggcgtcgtc
gtctccaacgcgacgctgcacaacgaggattacatcgccggccgggattcccgcggcgag
gagatccgcggcggcaaggacatccgcgtgggcgactgggttcaggtctatcgcgccggc
gacgtgatcccgaaggtggcggacgtcgatcttgcccgacgcacgtccgacgcggtgcca
tacgcttttccgaccacctgtcccgaatgcggttcggccgcgatccgcgaggagggcgac
gcggtccgccgctgcaccggtggcctgatctgtcccgcccaggcggtcgagaagctgaag
catttcgtctcccgcgcggccttcgacatcgaggggctgggggcgaaacaggtcgaacag
ttctaccgcgacggatggatcagggaaccggcggatatatttgaactcagggagaaattc
ggccccggcaacctgtcgcaactgaagaaccgcgaaggctggggggagaaatccgcgcag
aacctctttgccgccatcgacacccgccgggagatcccgctcgcacgtctgatcttcgcc
ctcggcatccgccatgtcggcgaaacctccgcccatctgctcgccacccattacggcacc
tggaccgaattcgaggccgcaatgcgtgacgccgaagtgggtgacggccaactctggtcc
gatctcctgtcgatcgacggcgtgggcgaggtcatggccacgtccctcgtcaccgccttc
catcaggaggccgagcgtgcctccatcgaccggctggtgcggcatctcaccgtgctcgag
gcggaaaggccgaaaagcgacagcccggtctccggcaagaccgtcgtcttcaccggcacg
ctcgaaaagatgacccgttcggaggcgaaggcgcgggcggaggcgctcggcgcgaaggtg
gcgggctccgtctcggcgaagacggatatcgtcgtcgccggccccggcgccgggtcgaag
gagaagaaggcgcgcgacctcggcctcgagatcctcgacgaggacggctggctggcgctg
atcggggacgcatga

DBGET integrated database retrieval system