KEGG   Ctenopharyngodon idella (grass carp): 127494254
Entry
127494254         CDS       T08802                                 
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cide00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    127494254
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cide03000]
    127494254
   04121 Ubiquitin system [BR:cide04121]
    127494254
   03036 Chromosome and associated proteins [BR:cide03036]
    127494254
Enzymes [BR:cide01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     127494254
Transcription factors [BR:cide03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    127494254
Ubiquitin system [BR:cide04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     127494254
Chromosome and associated proteins [BR:cide03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    127494254
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     127494254
SSDB
Motif
Pfam: PHD_4 zf-CXXC JHD F-box-like JmjC F-box LRR_6 Cupin_8 Rubredoxin
Other DBs
NCBI-GeneID: 127494254
NCBI-ProteinID: XP_051715956
LinkDB
Position
14:complement(28335999..28351751)
AA seq 1271 aa
MEEESSRYSKRLRTGTRRRYQDDGISDDEIEGKRSFDLDEKLQSNRYNSDLVKIMDGKDF
TLEYIQQEGLRDPIIFKKEDGLGIKMPDPDFSVSDVKLFVGSRRMVDVMDVTTQKGIEMS
MGQWRRYYETPASEREKLYNVISLEFSHTKLEHLVKRPASVDMIDWVDNMWPRHLKERQR
DSTNAIIEMQYPKVQKYCLMSVEGCFTDFHIDFGGTSVWYHIHRGGKVFWLIPPTPQNLE
LYENWVLSGKQGDIFLGDKATACQRIELKQGYTFMIPSGWIHAVYTPMDTLVFGGNFLHS
FNIPMQLNIYNIEDRTRVPAKFRYPFYFEMCWYVLERYLYCLTNTSHLTPEFQKHSLGIG
LKKEDVIKQGGIDGDAGSEEKEGVEVKEEPEDEAALTPPARPGVKVHLTPFELEGLWELL
HKLEDLPAHKKCVPAGIRNAPALLSDIRKLLEEHAHDDPKLSYTGKPIVKWPKRPSWYQP
PPPPLSLLYRPRAPGSSPMLPPVPRPVKPSSSISALRRRRVRCKRCEACLRTECGDCNYC
RDMRKFGGPGRLKKSCVLRQCLAPALPLTAVCAICKEGYQESEDFESVQTLMECSECAQI
THPECIKVHVPGEGVINKDLPSCWECPKCVQAKKTESSSSSDEETSSNGSRLSGPPAKRA
YREGIGVGGLRIGRRGRPPLSTSTPPLTRSRRQPPPSQRLLLQHQQNRKRAGALELQLRK
RIKLERNKILQSTRSSVSLSPKLLRQRSLERGGVIRAGPGRSISRGRGMSSCRGRGVRLR
GGGRGGGLRERMEAEVERDDSVEEEQEERKENGQYNGKENRPQRRGGKAGEDENGDSHRN
GESEGSSEGGEPTPSDTSVVLNDDVRGQGSCVTVTLQPSRGRRDPSAIVPKLEANLSSRS
LPQNHKALLRPPLRNGAPRSDSPHSPVDRLHLNKSPLSSSHTLTRSASKHSHVVRSLRSN
FKGSPHRLTRDRIGKKARSERAKSSDSCPSSTLRPSPEQNEGNEPGWEREVWVSVFRYLT
RAELCVCMAVCKSWYKWGCDKRLWTRISLSQCRSISPQALMGIIKRQPVTLDLSGANISK
KQLSWLINRLPGLKDLVLSGCNWASVSALSSPSCPLLRSLDLSWADGVKDAQIRDLLNPP
GSDNRSQMKNMQCLWLCGLEVTEATLRLIIRHMPLLTRLELSHCPITDGALNLLSAVGSS
TRNTLTHLSLAGCSRLTDRCLVYLRRLSCLSVLDLRGCKGVSRQACESFISELSVNALYC
LSDDKLIQRIS
NT seq 3816 nt   +upstreamnt  +downstreamnt
atggaagaggagagttcgcgttatagcaaacgcctgcggactggtacacggcggcgttac
caggatgatggaatttcagatgatgaaattgaagggaagaggtcctttgaccttgacgag
aaactccaaagtaaccgatacaactcggatctggtcaaaattatggatgggaaagacttc
accttggagtacatccaacaggagggactccgggaccccattatcttcaagaaagaagat
ggccttggcataaagatgcctgacccggactttagtgtcagtgatgtgaaattgtttgtg
ggcagtcgcaggatggtcgatgtgatggatgtgaccactcaaaaaggcattgagatgtca
atgggtcagtggaggagatactatgagacgccggcatctgagcgcgaaaagctgtacaat
gtcatcagccttgagttcagtcacacaaaactagagcatctagtcaagagacctgcctca
gttgatatgattgactgggtggacaacatgtggccacgtcatcttaaagaaagacagaga
gactccacgaatgccattatagaaatgcaataccctaaagtacagaagtattgtttgatg
agtgttgagggatgcttcacagatttccacatagactttggtggcacatcggtctggtat
cacatccacaggggagggaaggtgttctggctaatcccacccacacctcaaaacctggag
ctctatgagaactgggtgttgtcagggaagcaaggtgacatctttcttggcgataaagcc
accgcatgccaacggattgaactgaagcaaggctacacattcatgatcccctcaggctgg
atccatgcggtgtacactccgatggatactctggtgtttgggggtaactttctccacagc
tttaacattcccatgcagctcaacatttacaacattgaggaccgcacacgggtccctgct
aagttccgctaccctttctactttgagatgtgttggtatgtgttggagcgttacttgtac
tgtctgaccaacacatctcacctcacacctgagttccagaagcactcactgggcattggg
ctgaagaaggaagatgtgatcaaacaaggaggaattgatggtgatgcaggaagtgaagag
aaagagggtgtggaggtgaaggaggagcctgaggatgaggcagcacttactcctcccgct
cgtccaggggtgaaagttcacctgacaccctttgagctggagggactgtgggaattactg
cataagttggaggatttgccagcacacaagaaatgtgttccagcaggcatcagaaatgct
ccagcactgctcagtgacatacggaagctgctagaggaacatgcccatgatgaccccaaa
ttgtcttacactggaaaaccaattgtcaaatggcccaaaaggccctcgtggtatcagccg
ccaccgccgcctctgtctctgctttaccgcccacgtgctcccggttcatcccccatgttg
ccgccggttcctcggcccgtgaagccgtcttcctccatctcagctctgagacgcagacgc
gtgcgctgcaaacgctgtgaggcctgtctgcgcactgagtgcggcgactgcaactactgt
cgcgacatgaggaagtttggaggacctggcagactcaagaagagctgtgttctccgacag
tgtcttgcaccggcgctacctcttactgcagtatgtgccatatgtaaggaaggctatcaa
gagtctgaagactttgagtccgtccagacgctcatggaatgctccgaatgcgctcagatc
actcatccagaatgtataaaggtacatgtacccggtgagggtgttatcaataaggacctt
cccagttgttgggagtgtccaaaatgtgtccaggccaagaaaacagagtcttccagtagt
agtgacgaggagacgtcgtccaatggcagtcgcttgtctggtcctccagctaagcgagca
tacagagaggggattggggtggggggcttgcgtatagggcgcagaggtcgcccgcccctc
tccacctccaccccgcctctgacccgctccagacggcaaccgcccccttcccagagactc
ctgctgcaacaccagcagaacaggaagagagcaggggcactggagttacagctcaggaaa
agaataaaattggaaaggaacaaaatcctccagtcgacccgttcgtctgtctctctttct
ccaaagctcctgcgtcagcggagtctggagagagggggtgtaatcagagcaggacccggc
cggagcatttcccgtggccgagggatgtcatcctgtcgcggaagaggggtacgactacgc
ggcggtggcagaggtggaggtctgagagaaagaatggaggcggaagtagaaagagatgat
tctgtggaagaagaacaggaggaaaggaaagagaacggacagtataatggtaaagagaac
cgtcctcagagacgaggcggtaaagcaggtgaagatgagaacggcgacagtcatcgaaac
ggagagagcgagggaagcagtgagggaggggagccgactccatctgacacttctgtggtg
ctaaatgatgatgtcagaggccaggggtcctgcgtcacggtgacgttacagccatcgaga
ggtcggcgcgacccaagcgccattgttcccaaattggaagccaacttgtcttctagaagc
cttccgcaaaaccacaaagccctgctccgtcccccattgagaaatggcgcccctcgctca
gacagtcctcattcgcctgtggacagattgcacctaaacaaatcacctctttcatcatca
cacactctgacaaggagcgcatcgaaacactcacacgtggtgcggagtctgagatcaaac
tttaaaggctcccctcaccggctaactcgagacagaattgggaaaaaagctcgctcggaa
agggcgaagtcctctgactcctgtcccagttccaccttacggccttcaccggagcagaac
gaagggaacgagccaggctgggagagagaggtttgggtgtccgtgttccgctacttgacc
cgtgcagagctgtgcgtttgcatggccgtttgcaagagttggtacaaatggggctgtgac
aagcgtttatggacgcggatcagtctgagccaatgccgctctataagtccacaggccctc
atgggcatcatcaaacggcagcctgtcacactggacctctccggggccaacatctccaag
aagcagctcagttggctcatcaaccgcctgccaggccttaaagatctggtgctatcaggg
tgtaattgggcatcagtttcagcactgagctctccaagctgtcctttactgcgctcttta
gacctgagctgggcagatggcgtcaaggacgctcaaatcagggatctgctgaacccacca
ggcagtgataaccgttcccagatgaagaatatgcagtgcttgtggctgtgcggtctggag
gtgactgaagccacgctgaggctgatcatcagacacatgcctctgctcacacgcctggag
ctctcgcattgtcccatcacagatggtgctctcaacctcctcagcgcagtgggctcctcc
acacgcaacacactcacacacctcagcttagcaggttgcagccgcctgacagaccgatgt
ctggtgtacctgcgccgcttgtcctgtctgtccgtactggaccttcgtggctgcaaaggg
gtctcgcggcaagcatgcgaaagctttatctccgagctgtctgtcaatgccctctactgc
ctatcagatgacaaactcatccagaggatatcgtaa

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