Ctenopharyngodon idella (grass carp): 127494775
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Entry
127494775 CDS
T08802
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04010
MAPK signaling pathway
cide04020
Calcium signaling pathway
cide04510
Focal adhesion
cide04540
Gap junction
cide04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127494775
04020 Calcium signaling pathway
127494775
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127494775
04540 Gap junction
127494775
09142 Cell motility
04810 Regulation of actin cytoskeleton
127494775
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cide01001
]
127494775
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cide04090
]
127494775
Enzymes [BR:
cide01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
127494775
Protein kinases [BR:
cide01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
127494775
CD molecules [BR:
cide04090
]
Proteins
127494775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
I-set
Ig_2
ig
C2-set_2
Ig_VEGFR-1-like_5th
VEGFR-1-like_Ig-like
RIFIN
Motif
Other DBs
NCBI-GeneID:
127494775
NCBI-ProteinID:
XP_051716886
LinkDB
All DBs
Position
14:complement(24597605..24646921)
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AA seq
1071 aa
AA seq
DB search
MKSFTISRFQLTAMTTGLVLLCLGSSGLELNPNVPQVVLPINSSFTITCSGWGNVTWRFK
REENVPEFHTESRSPTSSVLSLEQVTWRHTGVYVCMENGTNVTREVAVFVPDPEVWFLEN
DHIMVTKTSEEGTIPCLVTDPSINVTLYDKETEMVVEGSYNPSVGYTAALEDRNYKCKGE
LNGEEKESILFHVYSIYAPEVLDPYINASKTVLKQGETLNINCTVHGAVLVYFSWDFPNK
DVGDIEPLTDFLSSTSMRSCLNITDISLARSGQYVCNVHESVQDIMASASIDITVLERGF
VALTSHLNRNVSARLGENVELKVEIEAYPKPSVSWSKDGTVIRGHSMRQEHETRFVSTLT
LVRIRLEQVGLYTVSVQNEDDIKEMTFDLEVKVPPQITELSDHHLPGKKHAVTCVAEGVP
SPSIQWFSCDSMTKCSNRSAVWSPLVEDPESVSIQTNVTYNNTRKIHQVHSQVTLLRPQL
VTIRCEASNERGARARDIRLVNSTLFSQVAVLAAVLALVVIAIISIIILIAVWRKKPRYE
IRWKVIESVSLDGHEYIYVDPIHLPYDLAWEMPRDSLVLGRTLGSGAFGRVVEATAYGLG
RSQSTTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGACTKQGPLYLVTEY
CRYGDLVDYLHRNKHSFLQNYADKNHIANGSQICNDSNVPTGKEYVSFGSECDGGYMDMT
KDEQTEYVPMQELTDTIKYADIQPSPYESPYQQDIYQEQGHRVDRSLVISDSPVLSYVDL
VGFSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLAKICDFGLARDIMHDNNYISKGST
FLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMNELFYSALKRGYRM
AKPSYASEDIYEVMRKCWDEKFEKRPEFSFLVHTMGNMLSDGYKKRYSQVSDSFHKSDHP
AVARVKPRVPSPFPGVFPPQSPTSDQTPNPTPRPQGDGELDEAPHNEYIIPIPDPKPEEE
NQDEPVLTEIPSSSLSSDEETVSMETPSTEPEREELLPEYSGSLEVEESFL
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtttcaccatcagccggttccaactgactgccatgacaacaggtttggttctg
ctctgtctgggaagttcaggtctggaactcaatcccaacgttccacaggtcgtcctccct
atcaactcctccttcaccatcacctgctccggctggggtaacgtcacctggcgcttcaag
cgggaggagaacgttccggagttccacaccgagagccgaagtcccacctccagtgttctc
agtctggagcaggtcacctggagacacacgggggtttatgtgtgcatggagaacgggaca
aatgttaccagagaggtggctgtctttgtgcctgatcctgaggtgtggttccttgagaac
gatcacataatggtgactaagacgagtgaggaaggcacaatcccgtgtctggtgacggac
ccgtcgataaacgtcacgctgtatgataaagaaacagagatggtggtggagggctcgtac
aaccccagcgtgggctacaccgccgccctggaggacagaaactacaaatgcaaaggagag
ttgaacggcgaggagaaagagtcgatcttgttccacgtctacagtatatatgctcccgag
gttctggatccctacatcaacgcctccaaaacggtcctgaaacagggcgagacactgaac
attaactgtaccgttcacggtgcggtgctcgtctacttctcctgggattttcccaacaaa
gacgtgggggacattgagcccttgactgacttcctgtcatccacaagcatgcggtcctgt
cttaacattacagacatctcgctggccagatcaggacaatatgtctgtaacgtgcatgag
agtgtgcaggacattatggcttcagccagtattgacatcaccgttctggaaagaggtttc
gtggctctcacttcacatctgaacaggaacgtctcggcgcggctcggagaaaacgtggag
ttgaaggttgagatcgaggcatatcccaaacccagcgttagctggtctaaagacggcact
gttatcagaggacacagcatgagacaggaacacgagacccggtttgtcagcacattgacc
ctggtcaggatccgactggagcaggtggggctctacactgttagcgtccaaaatgaagat
gacattaaagagatgacctttgacctagaggtgaaagttcctcctcagataactgaactc
tctgaccatcacctgcctggaaagaagcatgcagtcacctgtgtggcggagggtgtgccg
tctcccagcattcaatggttcagctgtgacagcatgaccaagtgcagtaacagaagtgct
gtatggagccccctagtggaggatcccgagagtgtctccatccagactaatgtcacctac
aacaacacacgcaagatccaccaagtgcacagtcaggtgaccctcctccggccgcagctg
gtcaccatccgctgtgaggccagtaatgagagaggagctcgagccagagacatcagactg
gtcaacagcacgttgttttctcaggtggctgttctggccgcagtcttggcactggtggtc
atcgccatcatctccatcatcatcctcatcgctgtgtggagaaagaagccacggtatgaa
atcaggtggaaggtcattgaatcagtcagtttagatggacacgagtacatctatgttgac
cccattcacctgccctatgacctggcctgggagatgccacgggacagtctggtgctgggt
cgtacgttgggatctggagcatttgggcgtgttgttgaggcaacagcatatggtcttggc
cgttcccaatccaccactaaagtggcggtgaaaatgctcaaatcgacggcacggagaagc
gagacacaagctctgatgtctgaactcaagatcatgagtcacctgggtcctcacctgaac
atcgtcaacctgctgggtgcttgcaccaaacaaggtccgttatatctggtgacagaatac
tgtcgctatggtgatctggtggactacctgcacaggaacaagcacagcttccttcagaac
tacgctgacaagaaccacatcgccaatggcagccagatctgtaacgatagcaatgtgcca
accggaaaagaatatgtgtcatttggcagtgagtgtgatggcggatatatggacatgacc
aaagatgagcagacggaatatgtcccgatgcaggagctcacggacactatcaagtatgca
gatatccagccgtcaccctacgagtccccttaccagcaagacatctaccaggagcaaggt
cacagggtggatcgttctctggtcatcagtgattctccggttctgagctacgttgacctt
gttggtttcagttaccaggtggcaaaaggcatggagttcctggcctcaaagaactgtgtt
catcgagatttggcggcaagaaacgttttgatctgtgagggcaaactggccaagatctgt
gactttggactggctagagacatcatgcacgacaacaactacatctccaaaggcagtacg
tttcttcctctgaagtggatggcgccggagagcatctttcataacctgtacaccactctg
agtgacgtctggtcttatggcatcttactctgggaaattttcactctgggaggaacacca
tatccagacctgccgatgaatgagttgttttacagcgctctgaagagaggttaccgcatg
gccaaaccctcgtacgcctccgaggacatttatgaggtcatgaggaaatgttgggatgag
aagtttgagaagcgtccagagttctcctttctggtgcacacgatggggaacatgctctca
gacggatataaaaagagatactctcaggtgagcgacagctttcataaaagcgatcaccct
gcagtggctcgtgtgaagccgagggtcccctctccgttcccgggtgtcttccctcctcaa
tctcccacctcagatcaaacaccaaaccctaccccgcgtccgcagggcgatggagagcta
gatgaggctccacacaacgagtacatcatccccatccctgaccccaagccagaggaggag
aaccaggatgagccagtgctgacggaaatcccctcgagctccttaagttctgatgaggag
accgtctccatggaaaccccgagtacggaacctgagcgggaggaactgctgccagaatat
tctggaagtctagaagtggaggagagcttcctgtga
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integrated database retrieval system
