Ctenopharyngodon idella (grass carp): 127496315
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Entry
127496315 CDS
T08802
Name
(RefSeq) nectin-4 isoform X1
KO
K06593
poliovirus receptor-related 4
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
cide04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
127496315
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
127496315
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cide04515
]
127496315
Cell adhesion molecules [BR:
cide04515
]
Immunoglobulin superfamily
Nectin family
127496315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
V-set
Ig_3
ig
Ig_2
C2-set_2
LapA_dom
Protocadherin
ECSCR
SsdA_C
TMEM154
DUF4446
Motif
Other DBs
NCBI-GeneID:
127496315
NCBI-ProteinID:
XP_051720175
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Position
2:complement(42137384..42157204)
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AA seq
572 aa
AA seq
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MTKLLTCIGVVIFTLMVCVHSEFIDPPPSAALRSFSDTQTRLPCRYVVEGEEKVVQVTWS
RQKPGGEKEQIIIGHFTEGPKASPDFLKRVQFESSEPTVDSTLLILNTKKADQATYTCHI
STFPSGNFERQISLTVWSLPISSLDPVILQEGQSFRVAASCRSVGHPPPRLSWDTEIPGQ
SQNRSGEDGVVTSQFYLHPLRSMNGRRLDCLVWHPALDGPRRISNQLIVHFPPDAEIVSS
GSWRIGHTGSELRCAVKGNPLPQNVTWSRKDGHLPEGVLVQRDRLLFVRPLNVSDEGLYV
CQTGNSVGTAKAQFKLEIGKDANDVAQAIKNPSETLLIIIGVSVAGALVVVMVITIIIVN
CHLRRKNRKLKRALSARTEEMISLSRQVSMRRLNSINSDPRTAAEEGSLMRMDSVMKNSV
LSVEDHSTLRDGEYDSLGRPAIYPSYRPDRGIKKLRDIEEDERSERRRRVESYVKSSNMS
LVCDSGLHRDQSSPPRSVSSGPTEAWKRGSRREIHRDEHDAYVQQERIPEGEEGNNYHLS
EAVSNYFQCSNGGLTPKENPNAIIIHSRRQII
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaactactgacctgcatcggcgtggtcatcttcacactgatggtttgtgttcac
agcgagttcatcgatccgcctccatccgcggccctgcgctcgttctcggacacgcagacc
aggctgccctgtcggtatgtggtggagggcgaggagaaggtggtgcaggtgacctggtcc
agacagaaaccaggaggggaaaaagagcagatcattataggacactttactgaaggacct
aaagcgtctccggatttcctgaagcgtgttcagttcgagagctctgagccgacggtcgac
tcgacgctgttgattctgaacaccaagaaggccgatcaggccacatacacctgccacatc
tccacctttccctccggaaacttcgagagacaaatcagcctgaccgtctggagtctgccg
atctcctcgctggatcctgtgatcctgcaggaagggcagtcgttccgtgtggctgcctcc
tgtcgttcggtcggacaccctccgccacgcctgtcctgggacacggaaattcccgggcag
tcgcagaaccggagcggagaggatggggtcgtgacctcgcagttttacctgcaccctctg
cgcagcatgaacggccgtcggctggactgtctggtgtggcatccggctctggacggcccg
cgcagaatcagcaaccagctcatcgtgcactttcctccagatgcagagattgttagttct
ggctcctggaggatcggccacaccggatcagagctcagatgtgcagtgaaaggaaacccg
ctgccgcagaacgtcacgtggagcaggaaagacgggcatctgccggagggagtgttggtt
cagagggacagactgctgttcgttcggccgctgaatgtatcagacgagggtctgtacgtc
tgccagacaggaaacagtgtgggaaccgctaaagcccagtttaaactggagatcggaaaa
gatgctaatgatgttgcacaagcgatcaagaacccatcagagactctcctcatcatcatc
ggggtgtctgtcgccggggctttggtggtcgtcatggtgatcaccatcattatcgtcaac
tgtcacctcagacgcaagaacaggaagctgaaaagggcgctcagtgcgagaacggaggag
atgatcagcctgtcgcggcaggtgtccatgaggagactcaactccatcaactctgatccc
aggacagcggcagaagagggttcactgatgcggatggacagtgtgatgaagaacagtgtt
ttatccgtggaggatcactccacgctgagagacggagagtacgacagtctcggacgtcct
gccatctacccgtcgtaccgaccggaccgaggcattaagaagctgagagacatcgaggag
gacgagagaagcgagcgcagacgaagagtcgagtcctacgtcaaatccagcaatatgtct
ctggtgtgtgattcagggcttcacagggaccagagttctcctcctcgctccgtgagctcc
ggtccgactgaagcatggaaacgcggctctcgcagagagattcaccgagacgaacatgat
gcatacgtgcagcaagagcgaattccagaaggagaagaaggaaacaactatcatttgtcc
gaggcggtttccaactacttccagtgcagcaacggaggactgacaccaaaggaaaacccc
aacgccatcatcatccactcgcgcagacagatcatctga
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