Ctenopharyngodon idella (grass carp): 127496769
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Entry
127496769 CDS
T08802
Name
(RefSeq) toll-like receptor 18 isoform X1
KO
K10159
toll-like receptor 2
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04145
Phagosome
cide04620
Toll-like receptor signaling pathway
cide05132
Salmonella infection
cide05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127496769
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
127496769
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127496769
09171 Infectious disease: bacterial
05132 Salmonella infection
127496769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127496769
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cide04147
]
127496769
04054 Pattern recognition receptors [BR:
cide04054
]
127496769
04090 CD molecules [BR:
cide04090
]
127496769
00536 Glycosaminoglycan binding proteins [BR:
cide00536
]
127496769
Membrane trafficking [BR:
cide04131
]
Endocytosis
Phagocytosis
Toll-like receptors
127496769
Exosome [BR:
cide04147
]
Exosomal proteins
Exosomal proteins of breast milk
127496769
Pattern recognition receptors [BR:
cide04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
127496769
CD molecules [BR:
cide04090
]
Proteins
127496769
Glycosaminoglycan binding proteins [BR:
cide00536
]
Hyaluronan
Cell surface receptors
127496769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
LRR_4
TIR_2
LRR_5
Motif
Other DBs
NCBI-GeneID:
127496769
NCBI-ProteinID:
XP_051720487
LinkDB
All DBs
Position
16:23337136..23346581
Genome browser
AA seq
852 aa
AA seq
DB search
MLFSLALLLSLQAVLQIKPTKAKHSCTIRSDGRAADCKGLWLDNVPITTLPDSLEELDLS
FNIIQVIRKQEFFKLNHLRVLKLNFNNISLIMDDAFHGNLLLEDLNLFNNSMTEIPFKAL
EFLTNLKVLEMSNNLYTQVSLGAAFLNFTKLEVLSIGGPLVSRLGSRDNYVLKNISLNKF
AIKTGTGFKSYEPGYFSNLNTKNLWFDIAIDKEPDVLPKILKDLANKTFDVLRFRNLFEF
QYYTGKRDIFYGLQFVKTQRLTFFRGKFNEEIMRMALLNVEISPIKALELLFIDFARSLN
KTQGSSVTNLTLEQLVLADISNPDIMRFDWSFTWLNHVRQFIVRNVNFNSVPCDSWPEMK
NVELLDISNNQLRDSYIYNPLCDTRNTLHKLKTFNISRNRLTSLSDLASLTEDFVKLTTI
DMSYNQLQYMGKRVCYWRQTITKVIAHHNSLTSDSFKCLPTSVIFLDLSYSSLDQLDMDY
FNKASNLTELLLSGNKIKFIPSGWRNPYLRTLALDGNSFGLVSMTSFKDMPSLRVLTAGN
NPYHCICDLYTFIQETTSKRKVTITDWPNNYKCYHPERLLNTMVSQYFPGHLACNITLII
IISVSTTAVVVLAITLLCYIFNVLWYIKATYQIIRAKYRAHKEGSGQTVDYTFHAFISYS
HLDADWVRDQLLPCLENAKPPYRLCIHERDFIPGKWIIDNIIENIENSRKVIFVLSRSFV
NSVWCNYELYFAQQRAIGKTFSDVILIVKEPIDPTSLPSKFCKLKKMLSTKTYLEWPQQP
TEQSFFWIQLRSVLGKPNVIRQRTTSQRSRLSSVRSVSLIELPQNQNSADEDDHQVSDQP
SNRCQQTLREIA
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgcttttctcgctggctctacttctcagcctccaagcagttctgcaaattaagccaact
aaagccaaacattcctgtacaattagatctgatggccgtgcagctgactgtaaaggtcta
tggctagacaatgtgcctataacaacgctgcctgactctttggaagagctcgacttgtct
ttcaatatcatacaggtcatccgcaaacaagaatttttcaaacttaatcatctgcgagtc
ctcaagcttaatttcaacaacatctctctgattatggatgatgcctttcatggaaacctt
ctgctggaggatctaaacttatttaataactctatgaccgaaatccccttcaaagctctt
gagttcctcacaaatttgaaggttttagaaatgtccaataatttgtacacacaagtatct
cttggtgctgcttttttgaatttcaccaagttggaagtgctgtccattggtggacccctg
gtcagtagattaggaagccgtgacaattatgtgttgaagaacatctcactgaacaaattt
gctattaaaactggtactggttttaaaagttatgaacctggatatttcagcaacctcaac
acaaaaaacttgtggttcgatatagctattgacaaagaaccagatgtgcttcctaagata
ttgaaagatctagccaacaagacttttgatgtgctacgttttcgaaacctttttgaattt
cagtactatactggtaaacgggatattttttatggcctgcagtttgtaaagactcaacgc
ctaacattctttcgaggtaaattcaatgaggaaattatgaggatggctctgctaaatgtg
gaaatcagtccaatcaaagccctggaactgctgttcatcgattttgctcgttcactgaat
aaaacgcagggatccagtgtgacaaacttgaccttggaacaactggttctcgcggacatc
agtaatccagatataatgcgcttcgactggagctttacctggcttaatcatgtccgccaa
ttcattgtacggaatgtaaacttcaacagtgtgccgtgcgactcgtggccggagatgaaa
aatgttgagcttctggacatctctaacaaccagctgagggacagttatatttataaccca
ctatgtgacactagaaacacattacacaagctcaaaacctttaacatcagccgtaatcga
cttaccagcctcagtgacttggcatctctgactgaggactttgtcaagctgacaacaatt
gatatgagttacaaccagctgcaatatatggggaagcgtgtctgttactggagacagacc
attaccaaagtaatcgctcatcataatagtctgacgagcgacagttttaagtgcctcccc
acttctgtaatcttcctcgatctttcatacagcagcctagaccagttggacatggactat
tttaataaggcatccaacctgacagagcttctcctcagcggcaacaagatcaaattcatc
ccatccggctggaggaatccatacttgaggacactcgctttagatggaaactcatttgga
cttgttagcatgacgtcttttaaggacatgcctagcctacgtgtcctgaccgcaggcaac
aacccttaccactgtatctgtgatctctacactttcatacaagaaaccacaagcaaaagg
aaggtgaccatcacagactggccgaacaactacaagtgttaccaccctgagcgtctgctc
aacacaatggtatcccaatacttccctggtcatttagcctgtaatattacactcattatc
atcatctctgtgtcaacaacggcggttgttgttcttgctatcacgcttttgtgctacatt
ttcaatgttctatggtacattaaagccacataccagatcatcagagccaaatacagagcc
cataaagaagggtcaggtcagactgtggactacacctttcatgctttcatttcttacagc
cacctggatgcagactgggtccgagaccagctgctcccttgtctagagaatgctaagcct
ccttaccgcctctgcatccatgaaagagacttcattccagggaagtggataattgacaac
atcattgagaacattgaaaatagtcgcaaggtaatcttcgtgttatcgcggagcttcgtg
aacagcgtgtggtgcaactacgagctctacttcgcccaacagcgggccattggaaagacg
ttcagtgatgtcattctgatcgtgaaggagcccattgatcccacttctcttcccagcaaa
ttctgcaagctcaaaaagatgctcagtaccaaaacctacctagagtggccccagcaaccc
acagaacagagctttttctggatccagctgaggagtgttctgggcaaaccaaacgtaata
agacagcgcacaaccagccagcgtagccgtctgtcttcagtgaggtccgtttcattgata
gagctgccgcagaaccagaattctgcagatgaagatgaccaccaggtcagcgatcagcct
tctaatagatgtcaacaaactttgagagaaattgcttga
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