Ctenopharyngodon idella (grass carp): 127498300 Help Entry 127498300         CDS       T08802                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism cide  Ctenopharyngodon idella (grass carp) Pathway cide04115   p53 signaling pathway cide04145   Phagosome cide04148   Efferocytosis cide04350   TGF-beta signaling pathway cide04510   Focal adhesion cide04512   ECM-receptor interaction cide04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cide00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     127498300   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     127498300  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     127498300    04148 Efferocytosis     127498300   09143 Cell growth and death    04115 p53 signaling pathway     127498300   09144 Cellular community - eukaryotes    04510 Focal adhesion     127498300   09142 Cell motility    04820 Cytoskeleton in muscle cells     127498300  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cide04131]     127498300   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:cide00536]     127498300 Membrane trafficking [BR:cide04131]  Endocytosis   Phagocytosis    Opsonins     127498300 Glycosaminoglycan binding proteins [BR:cide00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    127498300 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 cEGF TSP1_ADAMTS EGF Laminin_G_3 TSP1_CCN Laminin_G_1 Motif Other DBs NCBI-GeneID:  127498300 NCBI-ProteinID:  XP_051723485 LinkDB All DBs Position 17:18114394..18122831 Genome browser AA seq 1173 aa AA seqDB search MILRGLVLCLLLWSSESSRHAEMLEDDTVFDLFELTQLHKKHHGVSLVKGPDPYSPAYKI LNPNLIPSVPELSFRDLIYSIQRERGFIFTANLKQAKRTRGTLISVERTDGTGSVFEIIS NGKANTVDLVYWTASGQHVVSIDDVSVANGHWKNITVFVQEDRAQVYVGCEEIDNQELDV PIQQILSQENAGIASLKIAKGAAKSDRFMGVLQNVRFVFGTKLDAILRNRGCESSTFITD VMNLETSVNGSSPAIRTDYTGHKSKGLQDICGFSCDDLTSMFTELKGLGVVVKQLSNELR QVTADNNLLMNQIQIHKGVCLHNSIVYQDKDEWTVDSCTHCTCQNSATVCREISCPLMPC ANATVPDGECCPRCGTPSDAGIDGWSPWSEWTQCSVTCGRGIQQRGRSCDRINSNCDGTS VQTRDCYTQECDKRFKQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGKDCEGD GRQTEPCQKAPCPVDGGWGPWSPWDSCSVTCGGGLQRRHRLCNSPAPKYGGKECLGDSKG SRLCNAQLCPVDGCLSNPCFAGTKCTSFPDGSWTCGECPVGYTGDGVHCQDIDECKEVPD ACFVLNGVHQCENTEPGYNCLPCPPRYSGQQPFGRGTEQAIANKQVCTPRNPCEDGSHDC NKNANCIYLGVFSDIMFRCECKPGYAGNGYICGEDPDLDGWPNTDLHCVENATYHCKKDN CPDLPNSGQEDYDKDGTGDACDNDDDNDGIPDEGDNCPFIFNPRQYDHDRDQVGDRCDNC PYDSNPEQTDTDNNGEGDACAIDIDGDGILNEKDNCPYVYNTDQRDTDWDGVGDHCDNCP LEHNPDQIDSDSDNIGDKCDSNQDIDEDGHQNNLDNCPYIPNANQVDHDKDGKGDACDHD DDNDGVPDDKDNCRLAFNPDQLDSDGDGRGDVCKYDFDQDNVLDIHDVCPENFAISETDF RRFQMVPLDPTGTSQIDPNWVVRHQGKELLQTVNCDPGIAVGYDEFNAVDFSGTFFINTD RDDDYAGFVFGYQSSSRFYVVMWKQITQTYWSHTPTKAQGYSGLSIKVVNSTTGPGEHLR NALWHTGDTEGQVRTLWHDPKNIGWKDYTAYRWHLIHRPKTGHIRVIMYEGKKVMADSGS IIDKTYAGGRLGLFVFSQEMVYFSDLKYECRDV NT seq 3522 nt NT seq  +upstreamnt  +downstreamnt atgattctgagaggactcgttttgtgtctcttattgtggagctccgagagcagcagacat gcagaaatgctggaagatgataccgtgttcgacctgttcgagctcactcagctgcataag aagcatcacggggtgagtttggtgaagggacccgatccatacagccccgcgtacaagatc ctgaacccgaacctgatcccctccgtgcccgagctctccttcagggacctgatctactcc atccagagagagagaggcttcatcttcaccgccaacctcaaacaagccaaacgcacccgg ggcaccctgatctccgtggagaggactgacggcaccgggtccgtctttgagataatatcc aatgggaaagccaacaccgtggatctggtgtactggaccgcgagcggacagcatgtggtg tccatcgacgacgtgagcgtggcgaacgggcactggaagaacatcacggtgtttgtgcag gaggatcgagctcaggtttatgtgggctgcgaggagatcgacaatcaagaactcgatgtt ccgatccagcagattctgagtcaggagaacgcgggcatcgccagcctgaagatcgccaaa ggagccgccaaatccgatcgcttcatgggagttctccagaatgttcggtttgtttttgga acgaagctggacgcgattttacgcaatagaggatgcgagagctccaccttcatcacagat gtcatgaacttggagacctccgtgaatggatccagtccagccatccgcactgattacacc ggacacaagtctaaaggtctgcaggacatctgtggattctcctgcgacgatctgaccagc atgtttacggagctcaagggactcggtgtggtggtgaagcagttgtcaaacgagctccgc caagtgacagcagacaacaacttattaatgaaccagattcaaatccacaaaggagtctgt ctgcacaacagcattgtttaccaagacaaagacgagtggacggtggacagctgcacgcac tgcacatgtcagaactccgccactgtgtgtcgtgaaatctcctgccctctcatgccctgt gccaacgccactgtcccagatggtgaatgctgcccgcgctgtggaacaccgagtgatgcg ggcatagatggctggtcgccctggtccgaatggacacagtgttcggtgacctgtggaaga ggcattcagcagcgcggacgctcttgtgaccggatcaacagcaactgcgatggcacgtcc gtccagacgagagactgttacacgcaagaatgcgacaaacgcttcaagcaggatggcggc tggagccactggtctccctggtcttcctgctcagtgacgtgtggcgagggcgtcatcact cgcatccggctgtgcaactccccaactcctcagatgggtggcaaagactgcgagggagat ggtcgccagactgagccatgccagaaggccccgtgcccagtggatggaggttggggaccc tggtcaccatgggactcttgctccgtcacgtgcggtggaggactgcagcgcagacaccgt ttgtgtaacagccctgctcccaaatacggtggaaaagaatgtctgggtgactccaaagga agccgtttatgcaacgcccagttgtgtcctgttgatggttgtctctctaacccgtgcttc gctggcaccaaatgcactagcttccccgatggctcctggacgtgcggagagtgtccggtt ggatacactggggatggagtccactgtcaagacattgatgagtgcaaagaagttcctgat gcctgttttgtgctcaatggagtccatcagtgtgagaacacggaaccgggctacaactgc ctgccctgcccaccgcgctactccggacagcagcccttcggcagaggaacggagcaggcc attgccaataaacaggtctgcacaccaagaaacccatgtgaggacggcagccatgactgc aataagaatgccaactgcatctacctaggagtcttctccgacatcatgttccgctgtgaa tgtaaaccaggctatgctgggaatggttacatctgtggagaggacccagacctggacggc tggccaaacacggacctccactgtgtggaaaatgccacctaccactgcaagaaggacaac tgtcctgaccttcccaactctgggcaagaagactatgacaaagatggaactggagatgct tgtgacaatgatgatgacaatgatgggatccctgatgagggggacaattgcccgttcatc ttcaacccaagacagtacgaccacgaccgcgatcaagttggcgaccgatgcgataactgc ccgtacgacagtaatccagaacagaccgacaccgacaacaatggcgagggtgatgcgtgt gccatagacatcgatggtgacggcattctgaatgagaaggacaactgtccatatgtgtac aacactgaccagagagacactgactgggatggagtcggtgaccactgtgacaactgccca ctggagcacaaccctgaccagattgactcagactctgacaacattggagacaagtgtgac agcaaccaagacatcgatgaggatggacatcagaacaaccttgacaactgcccctacatc cccaacgccaaccaggtggaccacgacaaggatggcaaaggagacgcctgcgatcatgac gatgacaatgatggcgtacctgacgacaaagacaactgccgactcgccttcaacccagat caactggattcggatggtgatggccgaggtgatgtttgcaaatacgactttgaccaagat aacgtgctggatattcatgatgtctgcccggagaactttgccattagtgagacagatttc cgcaggttccagatggttcccctcgatcccacaggaacttcccaaatcgaccccaactgg gttgtccgtcaccagggcaaagaacttctgcagaccgtcaactgtgatcctggcattgct gttggttatgatgagttcaatgctgtggactttagcggcacattcttcatcaacacagac cgtgatgacgattatgccggctttgtgtttggctaccaatccagctcacgtttctatgtg gtgatgtggaaacagatcacacagacctactggtctcatacgcccaccaaagcccagggt tactctggactgtctattaaagtagtgaactcaactacaggacccggtgaacatctcagg aacgctttgtggcacactggagacaccgaaggacaagtgcgtaccctttggcacgacccc aagaacattggctggaaagattacactgcctacagatggcacctgatccacagacccaaa accggacacatcagagttatcatgtatgagggcaagaaagtcatggcagattcaggaagc atcattgacaagacatacgctggaggaagacttggcctctttgtcttctctcaagagatg gtttacttctcagacctcaaatacgaatgccgagatgtataa

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