KEGG   Ctenopharyngodon idella (grass carp): 127498430
Entry
127498430         CDS       T08802                                 
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cide00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127498430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cide03041]
    127498430
Spliceosome [BR:cide03041]
 Complex A
  U2 snRNP components
   U2 related factors
    127498430
 Complex B
    127498430
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    127498430
SSDB
Motif
Pfam: SMN_Tudor TUDOR DUF2067 DUF2730
Other DBs
NCBI-GeneID: 127498430
NCBI-ProteinID: XP_051723720
LinkDB
Position
17:complement(24378385..24381480)
AA seq 237 aa
MSEELVKQLSNYKAQLQQVEAALSTDPDNEDLLKLQKDLQEVIELTKDLLTSQPVEGAAS
TKSSETVAPTHSWRVGDHCMAIWSQDGQLYEAEIEEIDSENGTAAITFAGYGNAEVLPLH
VLKEVEEGRSREEKDGKPKSKKELLAEQREYKKKKAQKKVQRMKELEQEREVQKSKWQQF
NNKAYSKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTQYNDTSKYNVRHLMPQ
NT seq 714 nt   +upstreamnt  +downstreamnt
atgtctgaagagttggtaaagcagttgagcaattataaagctcagctgcagcaggtggaa
gcagcactctctacagatccagataatgaagatctgcttaaactgcagaaggatctccag
gaggtgattgagttgacaaaagacctgttgacatcacagcctgtggagggtgcagccagc
accaaaagctcagagacagtcgctcccactcacagctggagggttggagaccattgcatg
gccatctggagccaggatggacagttgtatgaggcggaaattgaagagattgacagtgag
aacggcacggcagccatcaccttcgctggctatggcaacgcagaggttttgccgcttcat
gtgctcaaagaagtggaggagggcaggagcagggaagagaaggatggaaagcccaaatcc
aagaaagagctgctggcagaacagagggaatataagaagaaaaaggcccaaaagaaggtg
cagcgcatgaaggagctggagcaagagagggaagttcagaaatccaaatggcagcaattt
aacaacaaagcctattccaaaaataagaaaggacaggtgaagaggagtatatttgcatct
ccagagagtgtgaatggaaaggttggcgtcggcacttgtggtatcgcagataaacccatg
acccagtacaatgacacttccaagtataatgtcaggcacctaatgccccagtga

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