Ctenopharyngodon idella (grass carp): 127499106
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Entry
127499106 CDS
T08802
Name
(RefSeq) beta-1,4-galactosyltransferase 2
KO
K07967
beta-1,4-galactosyltransferase 2 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide00052
Galactose metabolism
cide00510
N-Glycan biosynthesis
cide00513
Various types of N-glycan biosynthesis
cide00514
Other types of O-glycan biosynthesis
cide00515
Mannose type O-glycan biosynthesis
cide00533
Glycosaminoglycan biosynthesis - keratan sulfate
cide00601
Glycosphingolipid biosynthesis - lacto and neolacto series
cide01100
Metabolic pathways
Module
cide_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
cide_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
127499106
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
127499106
00513 Various types of N-glycan biosynthesis
127499106
00515 Mannose type O-glycan biosynthesis
127499106
00514 Other types of O-glycan biosynthesis
127499106
00533 Glycosaminoglycan biosynthesis - keratan sulfate
127499106
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
127499106
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cide01003
]
127499106
Enzymes [BR:
cide01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
127499106
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
127499106
2.4.1.90 N-acetyllactosamine synthase
127499106
Glycosyltransferases [BR:
cide01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
127499106
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
127499106
NCBI-ProteinID:
XP_051725195
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All DBs
Position
2:9084967..9215498
Genome browser
AA seq
379 aa
AA seq
DB search
MSRLMLGRTLERICKAVLLLCLVHFLIMMILYFDVYSQRFDIFSRFNNGRGANSSRGPHH
YFYNFSSGRPNTTFASYLATADHLLPSTKPEANHTPPTPKPLPPCPEVPPGLVGRLLIEF
SSQITLERVQRENPNVTEGGKYTPSDCRPKQKVAIIIPFRHRDNHLKYWLHYLHPVLRRQ
KIDYGIYIINQLGEDTFNRAKLLNVGYTEALKDAEYDCFIFSDVDLIPMDDRNLYHCYDQ
PRHFAIAMDKFGFRLPYAGYFGGVSGLSKKQFLKINGFPNEYWGWGGEDDDIYNRITLNG
MKVSRPDVRIGRYRMIKHERDKHNEPNPQRFSKIQNTKNTMRKDGISSLMYRVVSVKKYP
LYTNISVEIGKPPPRPFKG
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgagccggctgatgttgggccggaccctggagcggatctgcaaggctgtgctgttgctc
tgcctggtgcacttcctcattatgatgatcctctactttgatgtctacagccagcgtttt
gacatctttagccgcttcaacaatggccgtggagcgaacagctcacgaggaccccaccac
tacttctataacttttccagtggcaggcccaacactacctttgcaagctacttggccaca
gctgaccatcttctgcccagcaccaagccagaggcaaaccatactccaccaacccctaaa
ccattaccaccatgtccagaggttcctcctggtctggtggggcgtctcctcatcgaattc
agctcacagataaccctcgagcgggtgcaaagagagaaccctaatgtgacagaaggggga
aaatacactccttcggattgccggccgaaacaaaaggtggccatcatcatcccattcagg
cacagagacaaccatctgaaatactggcttcactacctgcacccagtcctgcgcagacag
aagatcgactatgggatctatatcatcaaccagcttggtgaggacacctttaatcgggcc
aagctgcttaatgttggctacacagaagctctgaaagatgcagaatacgactgcttcatt
ttcagtgatgtggacctgatccctatggacgaccggaacctctaccactgttacgaccag
ccccgtcactttgccattgccatggacaaattcggcttcaggctgccctatgcagggtat
tttggaggagtgtccggccttagcaaaaaacagttcctcaaaatcaatggcttcccaaat
gagtactggggttggggaggtgaagatgatgacatttacaacagaatcacactaaatggg
atgaaagtgtctcggcctgatgtgagaatcggccgctacaggatgatcaagcatgagaga
gacaagcacaatgagccaaacccccagaggttcagtaagatccagaacaccaagaacact
atgaggaaagatgggatcagctcgctgatgtacagagtggtgtctgtgaagaagtatccg
ctctataccaacatttccgtagagatcggcaagcctcctccaagacctttcaaaggatag
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