Ctenopharyngodon idella (grass carp): 127500088
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Entry
127500088 CDS
T08802
Name
(RefSeq) bile acid receptor isoform X1
KO
K08537
farnesoid X receptor
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127500088
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cide03310
]
127500088
Transcription factors [BR:
cide03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
127500088
Nuclear receptors [BR:
cide03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
127500088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
127500088
NCBI-ProteinID:
XP_051726948
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Position
18:complement(25152443..25169649)
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AA seq
483 aa
AA seq
DB search
MNEWVGHDVNVVGPLQIPPSDAFPLSEGSHFFDILAEQNSPLLHDQEVMPFTSYPSMQYT
SVEPSMSSPSYYSNQHCYSQYGGEEWYSTSTVFEMRKGPLEGGFDNELDESCPVVPTVCR
RSRNAAHSGRSKGEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYKCKSGGNCE
MDMYMRRKCQECRLRKCKEMGMLAECLLTEIQCKSKRLRKNTKASSDESIGDDVGDSRDA
KQFVSTTKPSKENIELSQDQQALISYIVDAHNKHRIPQDMAKKLLQEQFNAEENFLLLTE
MATSHVQVLVEFTKNIPGFQSLDHEDQIALLKGSAVEAMFLRSAQVFTKKLPNGHTEVLE
DRIRRSGISEEFMTPMFNFYKSIGELQMMQEEHALLTAITILSPDRPYVKDQQAVERLQE
PMLEVLRKVCKLQHPQEPQHFARLLGRLTELRTLNHHHAEMLESWRMSDHKFTPLLCEIW
DVQ
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagtgggtgggccatgacgtcaatgtggtgggacctttacagatcccacccagc
gatgcgttccccctatcagagggctcacacttttttgatattctggcagagcagaacagt
cctttgctacatgaccaggaggtcatgcccttcaccagctatcccagcatgcagtacacc
tcggtggagccctccatgtcatcaccatcatactactccaatcagcactgctactcacag
tatggtggggaggaatggtactctacatccactgtgtttgagatgaggaaaggaccattg
gagggtggctttgataatgagctcgacgagtcttgccctgtagtcccgactgtgtgcaga
aggtccagaaacgcagcccactccggaaggagcaaaggcgaggaactgtgtgtggtctgt
ggagataaagcatcagggtatcactacaatgcactcacatgtgaaggatgtaaaggtttc
ttcagaaggagtatcacaaagaatgctgtatataaatgtaagagtggaggaaactgtgag
atggacatgtacatgcgaaggaaatgccaagagtgtcgactcaggaagtgcaaagagatg
ggcatgcttgcagaatgcttgttaaccgaaatccagtgcaaatccaaaaggctgaggaaa
aacacaaaagcctcatctgacgaaagtataggggatgatgttggtgatagcagagatgct
aaacagtttgtatctactacaaaaccctccaaggaaaatatagaactgagccaagaccag
caggctttaataagttatatagttgacgctcacaacaaacatcgcatccctcaggatatg
gcaaaaaaactgctacaagagcaatttaacgcagaagaaaacttccttctactgaccgaa
atggcaactagtcacgtccaggtgttggttgagttcacaaaaaacataccaggttttcag
tctctggatcatgaagatcagatcgctttattgaaaggttccgccgtagaggcgatgttc
ctacgttcggcccaggttttcaccaagaaactgcccaatggacacacagaggtgctggag
gacaggatcagaaggagcggaatatctgaagagtttatgacacccatgtttaacttctat
aaaagcatcggggagctgcagatgatgcaagaggaacatgctttacttactgctatcaca
atcctctcaccagacagaccatatgtaaaagaccagcaggcagtggagcgtctgcaggag
cccatgttggaggtgctgaggaaggtctgtaagctacagcaccctcaggagccccagcac
tttgcaaggcttctcggtcgtctaactgagcttcgcaccctcaaccaccaccacgccgaa
atgctagagtcatggcgcatgagtgaccacaagttcacccccctcctctgtgagatctgg
gacgttcagtga
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