Ctenopharyngodon idella (grass carp): 127500200
Help
Entry
127500200 CDS
T08802
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04010
MAPK signaling pathway
cide04260
Cardiac muscle contraction
cide04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127500200
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
127500200
04261 Adrenergic signaling in cardiomyocytes
127500200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cide04040
]
127500200
Ion channels [BR:
cide04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
127500200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
dCache_1
VWA_3
VWA_2
Cache_3-Cache_2
DUF2201
Motif
Other DBs
NCBI-GeneID:
127500200
NCBI-ProteinID:
XP_051727125
LinkDB
All DBs
Position
18:complement(28390636..28518216)
Genome browser
AA seq
1090 aa
AA seq
DB search
MMVRSRSTDLTMNPFRISVMMMFIFASVHISCPSQFPSPLMIKEWVDQLQQELVSLADTA
SAGNDLKQIFMDNQNYFTVETNNAAQLVETAARNIENFLKKRATALQTLATAAEIFQMEH
QWKDEFEEDDIVYFNAKDNLDANETEGRKNRIRPEFKEDPSFKNRFTSYNHTAVHIPTDI
YDGSTIVLNELNWTEALEDVFKKNREEDPTLLWQVFGSATGLARYYPASPWMDARKTPSK
IDLYDVRRRPWYVQGAASPKDMLILVDASGSVSGLTLKLIRTSVSEMLETLSDDDYVNVV
HFNTKVNNTACFDHLVQANVRNKKILKDAVQNITAKGITNYTKGFEFAFNQLSNPNITRA
NCNKIIMLFTDGGEERAEEIFSRYNIDKKVRVFTFSVGQHNYDTGPIKWMACANKGYFYE
IPSIGAIRINTQEYLDVLSRPMVLADAKQVQWTNVYLDALELGLVITGTLPVFNKTKSRE
GGSQNQHQNQLILGVMGVDVSLDDIKRLTPRFTIGPNGYYFAIDPNGYVLLHPNLQPKNP
KFQEPVTLDFLDAELENDIKVQIRTLMIDRDPGEKTIETLVKSQDERYIDRGIRTYTWAP
VNGTDYSLALVLPEYSLHYIEANLGNTIKQAMFSETMQQEKFEEYGYTFIAPREYCKDLK
VSSNNTQFLMDFNEYIDRKTPNDPMCNVTLVNRLLLDAGLTADLVKVWKEQIVDGVLARF
VATDGGITRVYPKSAGEEWGENSETYDSSFYKRSLDNDIYIFTAPYINKSRESGYESGIL
VSKAVDLDINGAKLKPAVVGVKLNVSAWMNSFINATTKKNCKDEICGCLRNDKQVDCVIL
DDGGFLLMSNQDEYISQIGQFFGEVDPVLMITLVNTSLFSFNKTYDYQSVCDPERETKAA
AGLRSVYVPTIADMLTVGWWASTAVWSILQQLLLSLTLPNVMGTAYSEDDLSDAFSKESC
ITEQTQYFFENENKSFSGAMDCGNCSRMYRAEKLPNTNLVFLISDAKSSCLSCDPKPLRQ
AEQPSTGPDPCVLAQNPRYRKGPDVCFDNNADEDATDCGGGCSLSPSLWPMLALQLLLLW
LLTGTRTYLS
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcgctcgagatcaacagatctgaccatgaatccgttccgaatctccgtgatg
atgatgttcatcttcgcatctgttcatatctcgtgcccatcgcagttccccagtccgctc
atgataaaagaatgggtagatcaactgcagcaggagctggtttctctagcagacacagcc
agcgctgggaatgatcttaaacagatctttatggataatcagaattatttcactgtggaa
acaaataatgcggcacagcttgtggaaacagcggcacggaatatagaaaattttttgaag
aagcgagccacagctctacagactttggcaaccgcagcagagattttccaaatggagcat
caatggaaagatgaatttgaagaggacgatatagtttactttaatgccaaggataatctt
gatgccaatgaaacagaaggaaggaaaaaccgaatcagacctgaatttaaagaagacccg
tcattcaaaaaccgcttcacctcctacaaccatacggctgtgcatatccccacggacata
tatgacggttccactattgtgttaaatgagctgaactggactgaagcgttggaagacgtc
tttaagaaaaaccgagaagaggatccaacgctactatggcaagtgtttggcagcgctact
ggattagctcgctattacccagcttccccttggatggatgccaggaaaacacccagtaaa
atcgacctgtacgatgtgcgccgacgaccttggtatgttcaaggtgctgcttcgcccaag
gacatgctgattcttgttgatgcgagtggaagtgtgtctggactgacccttaagctgatt
cgaacttctgtcagtgaaatgctggagacactttccgatgatgattatgtcaatgtcgtc
cattttaacacaaaagtgaataacacagcatgtttcgaccacctggttcaagctaacgtc
cgcaataagaagatcttaaaagatgcagtgcagaacattacagccaagggcatcaccaac
tacaccaaaggcttcgaatttgccttcaatcagctctcaaatccaaacatcaccagagca
aactgcaacaagattataatgttgtttactgatggaggcgaggagagagcagaggaaatc
ttcagcagatacaacattgacaaaaaggtgcgtgtgttcacgttctctgtgggtcaacac
aactatgacacagggccaataaagtggatggcctgtgctaataaaggatatttctacgaa
atcccttccattggagccatccgcataaacacacaggaatatctagatgttttgagcagg
ccgatggtccttgcagatgcaaaacaagtgcagtggaccaacgtttacctggatgctctg
gagttgggcctagtcatcacaggcacactacctgtgttcaacaagaccaaatccagggag
ggcggatctcagaaccagcatcagaaccagttgattttaggagtgatgggggtggatgtg
tctctcgacgatatcaaaagattgacgccccgcttcacaattggtcctaatggatattat
ttcgcaattgacccaaacggttacgtgctgctccatccaaacctgcaaccaaagaacccc
aaattccaggaacctgttacactggattttctggatgcagagctggaaaatgacattaaa
gtccagatacggactttgatgattgacagagaccctggggagaaaacgatcgaaacgctt
gtgaaatctcaagatgagagatacattgatcgaggaatcaggacatatacctgggcacca
gttaacgggacagactacagcctggccttggtcttgcctgaatacagtctgcattacatc
gaggcaaacctggggaacactataaaacaagccatgttctctgagaccatgcagcaggag
aaatttgaggaatatgggtacacctttattgcacccagggaatactgcaaggacctgaaa
gtctcatccaacaacacccagttcctgatggacttcaatgagtacattgatagaaaaaca
ccaaatgatcctatgtgtaatgtcactcttgtaaaccggttgctgttggatgccggtctc
acagcggacctcgtcaaagtctggaaggagcagattgtagatggagttttggcccggttt
gtggctacagatggaggcattacacgtgtgtatcctaaaagtgctggggaagaatggggt
gaaaattctgagacctatgactcaagtttttacaaaaggagtttggacaatgacatatat
atcttcactgccccatacatcaataagagcagagagtctggttatgagtctggtatcctt
gtcagtaaagcagtggatttggacattaatggagcaaaactcaaacctgctgtggtggga
gtcaaactcaacgtgtcagcctggatgaacagcttcataaacgctaccaccaagaaaaat
tgcaaggatgagatctgcgggtgcctcaggaatgataagcaagtggactgtgtgattctg
gatgatggcggctttctgctcatgtccaatcaggatgaatatatctcgcagataggtcag
ttctttggtgaagtggaccctgttctgatgatcactctggtcaacacctcgctgttctcc
tttaataaaacctatgactaccagtccgtctgtgacccagagagagaaactaaagctgct
gcaggactccgttctgtatatgtgccaacgatagcagatatgctaactgtaggctggtgg
gcctccactgcggtctggtcaattttgcagcagcttctcctcagtctgactctcccaaat
gtcatgggaacagcatactcggaggatgacctctcggatgcgttctccaaagagagctgt
atcaccgaacagactcagtatttctttgagaacgagaacaaatctttctctggagctatg
gactgtggaaactgctccagaatgtaccgggcggagaagctccctaacacgaatttggta
tttttgatctctgacgcaaagagttcctgcctctcctgcgatcccaaaccactgagacaa
gccgaacagccctctactggtcctgacccatgtgttctggcccagaaccctcggtacagg
aaaggaccggatgtctgcttcgacaataacgcagatgaggacgcgactgactgtggtggt
ggctgcagtttgagtccgtctctctggccgatgttggctcttcagctccttctactctgg
ctgcttaccggaaccagaacatatttgtcctga
DBGET
integrated database retrieval system
