KEGG   Ctenopharyngodon idella (grass carp): 127500528
Entry
127500528         CDS       T08802                                 
Name
(RefSeq) tumor necrosis factor a (TNF superfamily, member 2)
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide04010  MAPK signaling pathway
cide04060  Cytokine-cytokine receptor interaction
cide04150  mTOR signaling pathway
cide04210  Apoptosis
cide04217  Necroptosis
cide04350  TGF-beta signaling pathway
cide04620  Toll-like receptor signaling pathway
cide04621  NOD-like receptor signaling pathway
cide04622  RIG-I-like receptor signaling pathway
cide04625  C-type lectin receptor signaling pathway
cide04920  Adipocytokine signaling pathway
cide05132  Salmonella infection
cide05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cide00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    127500528
   04350 TGF-beta signaling pathway
    127500528
   04150 mTOR signaling pathway
    127500528
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    127500528
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    127500528
   04217 Necroptosis
    127500528
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    127500528
   04621 NOD-like receptor signaling pathway
    127500528
   04622 RIG-I-like receptor signaling pathway
    127500528
   04625 C-type lectin receptor signaling pathway
    127500528
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    127500528
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    127500528
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    127500528
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:cide04052]
    127500528
   00536 Glycosaminoglycan binding proteins [BR:cide00536]
    127500528
Cytokines and neuropeptides [BR:cide04052]
 Cytokines
  Tumor necrosis fators
   127500528
Glycosaminoglycan binding proteins [BR:cide00536]
 Heparan sulfate / Heparin
  Cytokines
   127500528
SSDB
Motif
Pfam: TNF Mucin
Other DBs
NCBI-GeneID: 127500528
NCBI-ProteinID: XP_051727690
LinkDB
Position
19:21157215..21161801
AA seq 239 aa
MMEHASQVVLDLEKVTLPLPRVMVPRRKAGTSKSGVWRVCGALLAVALCAAAAVCFTLNK
SQSNQESATGLKLTMRDHFSKANFTSKAAIHLTGAYDPEVSNKTLDWRVNQDQAFSSGGL
KLVNREIIIPDDGIYFVYSQVSFHICCASDRGADQDIVHMSHAVMRISDSYGGKKALFSA
IRSACVHASDSDDLSYNTIYLGAAFQLQAGDKLLTETTPLLLPRVENENGKTFFGVFAL
NT seq 720 nt   +upstreamnt  +downstreamnt
atgatggagcatgccagtcaggtagtgttggatcttgaaaaagtaacgctgcccttgccg
agggtgatggtgccgaggaggaaggctggcacttcaaagtcaggcgtatggcgggtgtgt
ggggctcttctggctgtggccctgtgtgctgccgctgctgtctgcttcacgctcaacaag
tctcagagtaatcaggaaagtgcaactgggctcaagcttacaatgagagatcatttttca
aaagcaaatttcacttccaaggctgccatccatttaacaggtgcatacgaccctgaagtc
tctaataaaaccctagattggagagtgaaccaggaccaggctttctcttcaggcggcttg
aaattagtaaacagggagatcatcattcctgatgacggcatttacttcgtctacagccag
gtctctttccacatctgctgcgcgtctgacaggggcgcggaccaagacattgtgcatatg
agccacgcagttatgcgcatttccgattcctatggaggcaaaaaggcgcttttcagcgct
atccgctccgcctgcgtgcacgcgtctgacagtgacgatttgtcgtacaacacaatttat
ctcggtgcggccttccaattacaagctggagacaaactgctcaccgagacgacgccacta
ctcctgccccgcgtcgaaaatgaaaacggaaagaccttttttggggtgtttgctctgtaa

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