Ctenopharyngodon idella (grass carp): 127505261
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Entry
127505261 CDS
T08802
Name
(RefSeq) plakophilin-1 isoform X1
KO
K10387
plakophilin 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
127505261
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cide04812
]
127505261
Cytoskeleton proteins [BR:
cide04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
127505261
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ZER1-like_2nd
ARM_ARMC5
HEAT_EZ
HEAT_MROH2B_C
Motif
Other DBs
NCBI-GeneID:
127505261
NCBI-ProteinID:
XP_051736660
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All DBs
Position
22:3225869..3270518
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AA seq
688 aa
AA seq
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MTAEPIRSALGSVSMDDTSLVLPSDKKQRTGEQRVLEQVKSIKRSKSKMVKSDSIPSPTT
PASATEFSEPKFQFSPTNLNGTLFKYSGSSMMTTQSRVSGRSLSVHNTVRRQSQNSQWDS
QMNWNVQSQSNGMKSSGSDPALSKTGAANTQKTKEMSSTVRYNRATARSMKLDNSTMINA
SRSQTVKKITKSKSEASGANGATGAIPDITLQEAVEYLTHSDVSYQLCGASFIQHQTFKE
DTAKQEVWRIGGIPALVQLLKSDNSQLQQTAAAALRNVVFKENEIKLEVESCEGLEAILT
LLRNTNVTETQKQLTGLLWNLSSADALKPELIRNALPMLTESIVVPFNFWTDSNTNKHID
PEVFYNTTGCLRNLSCASEKERISMRNCTRLIDSLMTYVQTQVERGESDDKSVENCVCIL
HNLSYQLEKEAPEHFTQFSIPDGSPNENMNKNSLFSPRSTKTQKKFSFPAMEEGEPEGVK
WLYHRKSLQLYLTLLGSSQKEAILEACCGALQNLTASKSPLSTVMSQSIIQKQQGLSVIS
PLLNSANSGLQKTAMSLVGNMSRVTSLRSTMAKEVLPKVSSVLLAVTPKMVESDSSIATA
CRVMHTLMLADPESGKKVLNSKLIDSLSLLSTNVLYETARKAAAVLLWSMWGQKDIQNVL
KKQGMNKDTFINDVTATAYKAATIMKGY
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgactgccgaaccgattcgctctgctctgggctccgtctcgatggatgacacctcgctg
gtcctgccgtccgacaaaaaacagcggacgggagagcagcgcgtgctggagcaggttaaa
agcattaagagaagcaaatcgaagatggttaagagtgactccattccgtcgccaacaact
ccggcgtcagcgacagagttcagtgagccgaaattccagttctcacctacaaatctgaac
gggacgctcttcaaatacagcggctccagcatgatgacaacccagagcagagtgtctggt
cgcagcttatctgtgcacaacacggtgagaagacagtcccagaacagccagtgggactct
cagatgaactggaatgtgcagtctcaatccaatgggatgaagtccagtggcagcgaccca
gccttgagtaagacaggtgccgcaaatacccagaagaccaaggagatgtcatctaccgtg
cgatataaccgcgcaactgcacgatctatgaagctggataatagcacaatgatcaacgcc
agccgatcacagaccgtgaagaaaatcaccaagagcaaatcagaagcttcgggtgcaaat
ggtgccacaggagcaatacctgacatcactctgcaggaagcagtggagtatctgactcac
tcggatgtgagctatcagctgtgtggagcttcattcatacagcatcaaaccttcaaagaa
gacacagccaaacaagaggtttggcggataggagggattcctgctcttgtacagttgctg
aaaagtgacaattcacagctgcaacagacagccgccgctgcactgcgcaacgtggttttt
aaagaaaatgaaatcaaacttgaggtggaaagttgtgaaggactagaagccattctgacc
ttactcagaaacaccaatgtaacagaaacccagaaacaacttactggtctgttgtggaat
ctgtcctcggctgatgcgctgaagccagagctgatcaggaatgccctgcccatgcttaca
gaaagcattgtggtgccattcaacttttggactgacagcaacaccaacaaacacattgat
cctgaggtcttctacaacaccactggctgtttaagaaacctcagctgtgctagcgaaaag
gagaggatatctatgaggaactgcacgcgacttatcgactctctcatgacttatgttcag
actcaggtggaaagaggagagtcagatgataagtcagtggaaaactgtgtctgcatactc
cataacttgagctaccagctggagaaagaggctcctgaacacttcacacagttctctatc
cctgatgggagcccaaatgagaacatgaacaaaaacagcctcttcagccccaggagcacc
aagactcaaaagaagttcagcttcccagccatggaggagggtgagcctgaaggagtgaaa
tggttgtaccaccgaaagtccctgcagctgtacctgactctgctgggctccagtcagaaa
gaggccattctggaggcatgctgtggagctctgcagaacctcactgcttcaaagagccct
ttgtccactgtgatgagccaaagcatcatacagaagcagcaaggcctgtctgtcatttcc
cccctgctgaattctgcaaactctggcctacagaagaccgccatgtccttagtgggcaac
atgtctagggtgacatctctacggagtactatggccaaggaagttcttcccaaagtcagc
tctgtgctcttggctgtgaccccgaaaatggttgaatcggacagctccatcgctacagcg
tgccgtgtgatgcacacactcatgctggcagatcctgagagtggcaagaaggtgttgaac
tcaaaactcattgactctctgagcttgctgagtacaaatgtattatacgagacagccaga
aaagctgctgcagttcttctctggagtatgtggggacaaaaagacatccagaatgtgctg
aaaaagcaagggatgaacaaggacacatttataaatgatgtcactgctacagcgtacaaa
gcagcaacaatcatgaaaggatactga
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