Ctenopharyngodon idella (grass carp): 127508012
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Entry
127508012 CDS
T08802
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4a isoform X1
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cide04040
]
127508012
Ion channels [BR:
cide04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
127508012
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Motif
Other DBs
NCBI-GeneID:
127508012
NCBI-ProteinID:
XP_051741444
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All DBs
Position
3:29824013..29842817
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AA seq
1257 aa
AA seq
DB search
MIKMKKIEKENEGGAGERKSEKDQSWIPKMIKKRVCTTFVEDASSNGALCQCGGARENHA
SITAGDHVVSQWDSEQHTSEYPTDAFGQLEFAGAGRRNSPFLRLSHDTPPDNVYSLMTSQ
WGLPVPNLVVSVVGGEGKEQVKTWVREVIRQGLVRAAQSTGAWIMTSGLREGVGRCVGEA
VRDHCATASSLSQAKVIAVGVAPWGLIHQRQQLINPQGSFPARYYVHNMPRESSCLDNNH
QAFLLVDDGSVGHRGGETTFRANLEDFISHQRTGIWGSGSIEIPVLCVLIAGDATMLERV
DLSLKNTTPWLVLAGSGSAADLIAGILKDLSTPLSPPVSPTLPTADEESSKSASVELRDR
VRERIKKHFPSETELEKLVDQGLSIYHNRDLITVFRGDKEGPDDFDTIILKALVRAAKRD
SNDASEYTEELKLAVAWNRVDIAKSELFHGDIQWRYEDMEESMTDALVNDKPHFVKLFVE
NGLNILDYLTYHRLECLYSSLSDCDLVSSFLQRRLQERVGLAASQTRLSAPPDENSSFKS
HGTTLTTPSAARDLTLYEVSRVLSEIMEDVCQPFYYGPLGLHQGVASRKAMKHVNKLLLS
ESVYRKQRCMTPWIALFIWAVLQNRREMSIYFWQMAGESVLSALAGCKILRELSKLETET
ETKLSMKELAQTFENLAHDVFSECYQSNESRSCKLLIRQSPVWGGATCLQMATAAEARLF
FSHDGVQTLLSEIWWGDMDSNTEVWKLVLSFFLPPFIYTKLISFKEQEEDEEDFNQGKEF
DSADGAESLAEVLNTDEDVEECNALKGNQKAPKAILQKRPFIFHRWRQFWFAPVTSFLGN
VLMYFLFLLLFAYVLLVDFKPPPPDGPAPLELVLYFWVFTLVCEEIRQTFFVGSTTVLQR
MKLYIQDIWNKCDITALALFILGLLCRMFPWSYNFGRSVMCVDYMVFTLRLIHIFAVHKQ
LGPKIIIVGKMVKDVFFFLFFLGVWLMAYGVANQALLYSYDSRPGWIIRRVFYRPYMHIY
GQIPLDEIDADKRHEKQCTDNVTLIHDGAEPCPQSDANWLVLILLSVYLLVTNILLVNLL
IAMFSYTFNKVQEHSDVHWKFQRYNLIVEYHSRPCLSPPFIIISHLHIFFKRVIQGLPSV
KSQHFMLDLKSKEASLLNTWESTLKENLLSTQGKKQRESDTERLKRTSTKVDSVLKQMVE
VRDHDRRLRKLESEVEYCSTALSWIVEALSQSDLVKQTRPPPLASKGIASKRPTFSR
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaatgaagaaaattgaaaaagaaaatgaaggaggcgcaggagagagaaaatcc
gaaaaagatcagagctggatcccaaagatgattaaaaagagagtgtgcaccacctttgtg
gaggacgcatccagtaatggggctttgtgccagtgtggtggagcacgggaaaatcatgca
tccataacagcaggtgatcatgtagtcagccaatgggacagtgaacagcacacctctgaa
taccccactgatgcctttggacagctggagtttgctggagctggacggagaaacagtcct
tttctgcgtctgtcacatgacacaccacctgacaacgtgtactcattgatgacgtcacaa
tggggtttgccggtacccaatctggtggtgtctgtggtggggggagaggggaaggagcag
gtgaagacgtgggtgcgagaagtgatcagacagggtcttgtccgggccgcacagagcaca
ggggcttggatcatgacgtcaggtctgagggagggtgttggccgctgtgtaggtgaggca
gtaagggatcattgtgcaacagcttcatctctttcccaggctaaagttattgctgttggt
gttgcgccttggggcttgattcaccaacgtcagcaactcataaacccacagggtagcttc
cctgcacggtactatgtgcacaacatgccccgtgaatccagctgcctggacaacaaccac
caggccttcctcctagtggatgatgggagtgtaggccacagaggcggtgagacaacgttc
agagccaacctggaggacttcatctcccatcagcgcactggcatctgggggagtggcagc
attgagattccggttttgtgtgtgctgatcgcaggtgatgctacaatgctagagagagtg
gatttatctctgaaaaacaccactccatggttggtactggcagggtcgggttcagcagca
gacctgatagcaggaatactgaaggacctcagcacacctctgagtccacccgtgagtccc
actttgccaaccgctgacgaggaaagcagcaagagcgccagtgttgagctcagggaccga
gtgagagagagaattaagaaacatttcccttccgagacagaactggagaagcttgtggat
cagggactcagtatctatcacaacagagatctgatcaccgtgttccgtggagacaaggaa
gggccagatgactttgacacaatcatccttaaagctcttgtaagagctgctaaacgggat
tctaatgatgctagcgagtacactgaagagctgaagctggcggtggcctggaacagggtg
gatatcgccaagagtgaactcttccatggtgacatccagtggaggtatgaagacatggag
gaatcaatgactgatgcgctggtgaatgataagccccattttgtgaaactctttgtggaa
aatggcttgaacattctggactatctgacgtaccatcgtttagagtgcctttacagctca
ctgtcggactgtgatctggtatcttcattcctccagagaaggctgcaggagcgagtgggc
ttagcagcttctcagacccgattatctgccccgcctgatgagaattcctctttcaagagc
cacggaacaaccctcaccacaccatctgctgctcgagaccttaccctatatgaggtttca
cgggtgttatcggaaatcatggaagatgtctgtcagccattttactatggccctcttggt
ctacatcagggagtcgcctcaaggaaagcaatgaagcatgtgaataagttgctgctatct
gagagtgtgtaccggaagcagcgctgtatgactccctggatagctctgttcatttgggcc
gttctgcagaatcgcagagaaatgtccatatacttctggcaaatggcgggggagtcagtg
ctaagtgctcttgccgggtgtaagatattaagagagctctctaagttggagacagagact
gagaccaagctctccatgaaggaactagctcagacctttgagaatctggcacatgatgtg
ttcagtgagtgttaccagagcaatgagagccgctcttgcaagcttctcatcagacagtca
cctgtatggggtggcgccacctgtctgcagatggccacagcggctgaagcccgcctcttc
ttcagccatgacggagttcagactttattgtcagagatttggtggggggacatggacagc
aatacagaggtgtggaaactggtcctctcgtttttcctgcctcccttcatctacaccaaa
ctcatcagtttcaaggagcaggaggaggatgaagaggactttaatcagggtaaagaattc
gacagtgccgatggagccgagtcattggctgaagtcttaaacacagatgaagatgtggag
gaatgtaatgctttaaaaggaaaccaaaaagcaccaaaggctatccttcaaaaacggcct
tttatattccatcgatggcggcagttctggtttgcaccggtcacttcgtttctaggcaat
gtgttgatgtacttcctcttcctcctcctgtttgcctacgtcctattggtcgacttcaag
cctccacctcctgacggacccgcccctttggagcttgtgttgtatttctgggtttttact
ctggtctgtgaggaaattcgacagactttttttgtaggatctaccactgtacttcaaagg
atgaagttgtacatccaagacatctggaacaagtgtgacatcactgcgctcgcgctcttc
attcttgggcttctctgcaggatgtttccgtggtcgtacaattttggtcgttcggtcatg
tgtgtcgactatatggtcttcacactcagactcattcatatatttgcagttcacaaacaa
cttggtcccaaaatcataatagttggcaaaatggtgaaagatgtgtttttcttcctgttc
ttcctgggggtgtggctaatggcatatggagtagccaatcaggcactgctgtactcctac
gactctcgtcctggttggataattcggcgcgtgttctacaggccatacatgcacatatat
gggcaaataccactggatgaaattgatgctgacaagcgacatgagaaacagtgtacagac
aacgtcactctcatccatgacggggcggagccctgcccacagtctgacgctaattggctg
gtccttattctgctgtcagtctacttgttggtcaccaatattctattggtgaacttgctc
attgcaatgttcagttacacattcaataaagtccaggagcacagcgatgtgcactggaag
ttccagcgctacaacctgattgtggagtaccactcgcgcccctgcctctccccgcccttc
atcatcatctcccacctgcatatcttcttcaaaagggtcattcagggattgccctctgtt
aagagccaacactttatgctggacctgaaaagcaaagaggccagtttgctgaacacatgg
gagtcgacgctgaaggagaacctgctttccacgcaaggcaagaaacaaagagagagcgac
acggagcggctcaaacgcacctccacaaaggtggacagcgtcctgaagcagatggtggag
gttcgtgatcacgatcgcaggttgagaaagctggagtcggaggtggagtactgctctact
gccctctcctggatagtggaggcgttgtctcagagtgatcttgtgaaacagactcgtcca
cctcctcttgcttccaaaggtattgcttctaaacgtcccactttttccagataa
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