Ctenopharyngodon idella (grass carp): 127508081
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Entry
127508081 CDS
T08802
Name
(RefSeq) low-density lipoprotein receptor-like
KO
K12473
low-density lipoprotein receptor
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03272
Virion - Hepatitis viruses
cide04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
127508081
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127508081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127508081
Membrane trafficking [BR:
cide04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
127508081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
TMEM154
Vgb_lyase
Psg1
hEGF
Motif
Other DBs
NCBI-GeneID:
127508081
NCBI-ProteinID:
XP_051741633
LinkDB
All DBs
Position
3:20220461..20232690
Genome browser
AA seq
869 aa
AA seq
DB search
MGISLMFLLAVTFFCGVQTGVLTCDPPQYQCGNGKCITSRWVCDETDDCGDGTDELPAAC
LMKTCRPSEFSCGGRLNQCVPKTWKCDGKADCENSADEEGCAPRKCLDGEFRCINGQCVS
TAFVCDGETDCDDGSDEVSCPPTTCGSGSFRCNNAQCVPRLWVCDGDADCADGSDELPQK
CSPGTPKPTKNPCSSMEFHCSSGECIHSSWKCDGGEDCLDRSDEKNCSLPTCRPDEFQCG
DGSCIHGSRQCNHIYDCKDMSDELGCVNATHCDPPHRFKCRSGECIGMEKVCNKQRDCRD
WSDEPLRECDSNECLYNNGGCSHICNDLKIGYECLCPTGFQLVDKRNCEDINECANPDTC
SQICVNQIGSYKCECEDGYQVDPASKACKAIGTIAYLFFTNRHEVRKMTLDRSEYARVIP
RLKNVVALDMNVASREIYWSDLSLKKIYRAPMDTADDSSQHNVVIGSGLDAPEGIAVDWI
HGNIYWTDSIKGAISVATADGSRRKTLFKENLAKPRAIVVDPIKNFMFWTDWGTPAKIER
GGLNGGDRSALVTDNIEWPNGITLDLLNQRLYWVDSKLHTLSSISVQGGGRRTLIIDQGK
LAHPLGLTVFEEKVFWTDVSNNAILSANRVTGGDITKVAEHLSSPEDIVLYHNLKQPSGT
NWCGANNGHCEFLCLAAPQINKSSPKYTCACPDNMMLAKDMRKCIPAVVTPATPIRPKIV
TTSHPQVTSKVTPKSVGPSTTNAQPSPTPAPVTPNRPTQAATFKPSQTTTKLPLSTQTDD
HYNNVKVSKPSSSTPWALYIVVPLAILCLVVGGAVLFWRKWRQKNTNSIHFDNPVYQKTT
EDQVHLCRNRSSDGYFYPQRHIVNLDDEI
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgggcatctctttaatgtttttactggcagttactttcttctgtggtgttcaaacaggt
gtcttgacttgtgatccaccgcagtatcagtgtggcaatggaaagtgcatcacatcgaga
tgggtatgtgatgaaactgatgactgtggagacggcactgatgaacttcctgctgcctgc
ttgatgaagacctgcagacccagtgaattcagttgtggtgggcgactaaaccagtgtgtg
cctaagacctggaagtgtgacggcaaagcagactgtgagaatagtgcggatgaggaaggc
tgtgctcctcgaaagtgtctggatggcgaattccggtgcatcaatggccagtgtgtgtca
actgcatttgtgtgtgatggtgaaacagactgtgacgacggcagtgatgaagtctcctgt
ccgcccaccacgtgtggctccggctccttcaggtgcaacaatgcacagtgtgtgcctcgg
ctgtgggtgtgcgatggagatgccgactgtgctgacggctccgatgaattgcctcagaaa
tgcagcccagggacacctaaacctaccaaaaatccctgctcctctatggaattccattgc
agcagtggggaatgcatacacagtagctggaaatgcgatgggggagaagactgcttggat
cgctcagatgagaaaaactgctctttgcccacatgccgaccggatgagttccaatgtggt
gacggatcttgcatccatggcagccggcagtgcaaccacatatatgactgcaaagatatg
agtgatgagctgggctgtgtcaatgcaacccattgtgatccaccacacaggtttaaatgc
cgcagcggtgaatgcatcggcatggaaaaagtttgcaacaagcaacgggactgtagagat
tggtccgatgagccgttaagagaatgtgattctaatgagtgcctttacaacaatggtggt
tgctctcatatctgtaatgacctgaagattggttatgagtgtctgtgtcccactggcttc
caattggtggacaagagaaactgtgaagacatcaatgagtgcgccaacccagacacctgc
agccaaatttgtgtcaaccagataggtagttacaagtgtgagtgcgaagatggctaccag
gtggacccagccagcaaggcctgcaaagctattggaaccatcgcctacttatttttcact
aatcgccatgaggtaaggaagatgactctggatcgtagcgagtatgcacgtgtcattccc
cgcctgaagaacgttgtggcgctggatatgaatgttgcttccagggagatctactggtcg
gatttatccctcaaaaagatatacagagcaccaatggacactgcagatgactcctctcaa
cacaacgttgtgattggcagcggcttagatgcacctgaaggtatcgctgtggactggatc
cacggaaacatctactggacggacagtatcaaaggtgccatatctgtggcaacagcggat
ggaagcagacgcaagactctcttcaaagagaacctggccaagccgcgtgctatagtggtc
gaccctattaagaacttcatgttctggactgactggggcacaccagccaagatcgagaga
ggtggtcttaatggaggggaccgcagtgccctagttacagataacattgaatggcccaac
ggaataacccttgaccttttgaaccagcgtctgtactgggttgactccaaactacatact
ctctccagcatcagtgtacagggaggtggtcggcgaactctaatcattgaccaaggcaaa
cttgcccaccctctgggtctcactgtttttgaggagaaagtgttttggacggatgtgagc
aataacgcaattcttagtgcaaatcgtgtgactggaggagacatcacaaaagtggctgaa
cacctctcatccccagaggacattgtcctgtaccacaacctcaaacagcccagtggaacc
aactggtgcggggccaacaacggtcactgtgagttcctgtgccttgctgcccctcaaatc
aataaatcctcacccaagtacacgtgtgcctgcccagacaatatgatgttggccaaagac
atgcgaaaatgtattccagctgtagtcacaccagcaactcctatcaggcccaaaatagtt
acaactagtcatcctcaagtaacttcaaaggtgacaccaaaatctgttggcccttccaca
accaatgcacaaccttcacctactcctgctcctgtgacccctaaccgacccactcaagct
gccactttcaagccttcccaaaccacaactaaacttcctttatccacccagacagatgac
cactacaataatgttaaagtctccaaaccatcatcttccacaccgtgggccttgtacatt
gtggttcctcttgcaatcctgtgtttggttgtgggtggcgctgtgctgttctggagaaag
tggcgtcagaaaaataccaacagcatccactttgacaacccggtttatcaaaagaccact
gaggaccaggtgcacttatgcagaaaccgtagttctgatggctatttttacccgcagaga
cacattgtgaatcttgatgatgaaatatga
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