Ctenopharyngodon idella (grass carp): 127508367
Help
Entry
127508367 CDS
T08802
Name
(RefSeq) actin, cytoplasmic 2
KO
K05692
actin beta/gamma 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03082
ATP-dependent chromatin remodeling
cide04145
Phagosome
cide04210
Apoptosis
cide04510
Focal adhesion
cide04520
Adherens junction
cide04530
Tight junction
cide04810
Regulation of actin cytoskeleton
cide04814
Motor proteins
cide04820
Cytoskeleton in muscle cells
cide05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127508367
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127508367
09143 Cell growth and death
04210 Apoptosis
127508367
09144 Cellular community - eukaryotes
04510 Focal adhesion
127508367
04520 Adherens junction
127508367
04530 Tight junction
127508367
09142 Cell motility
04814 Motor proteins
127508367
04820 Cytoskeleton in muscle cells
127508367
04810 Regulation of actin cytoskeleton
127508367
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127508367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cide03021
]
127508367
03019 Messenger RNA biogenesis [BR:
cide03019
]
127508367
03036 Chromosome and associated proteins [BR:
cide03036
]
127508367
03029 Mitochondrial biogenesis [BR:
cide03029
]
127508367
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cide04812
]
127508367
04147 Exosome [BR:
cide04147
]
127508367
Transcription machinery [BR:
cide03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127508367
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
127508367
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
127508367
NuA4 complex
127508367
Chromatin remodeling factors
BAF complex
127508367
PBAF complex
127508367
GBAF(ncBAF) complex
127508367
SWR1 complex
127508367
Mitochondrial biogenesis [BR:
cide03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
127508367
Cytoskeleton proteins [BR:
cide04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
127508367
Exosome [BR:
cide04147
]
Exosomal proteins
Proteins found in most exosomes
127508367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
127508367
NCBI-ProteinID:
XP_051742179
LinkDB
All DBs
Position
3:complement(35592632..35596374)
Genome browser
AA seq
375 aa
AA seq
DB search
MDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITSLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaaattgccgcactggttgttgacaacggatccggtatgtgcaaagccgga
ttcgctggagatgatgctccccgtgctgtcttcccatccatcgtgggtcgccccagacat
cagggcgtcatggtcggtatgggacagaaggacagctatgttggtgacgaggctcagagc
aagagaggtatcctgaccctgaagtaccccatcgagcacggtattgtcaccaactgggac
gatatggagaagatctggcatcacaccttctacaacgagctgcgtgttgccccagaggag
caccccgtcctgctcacagaggcccccctgaaccccaaagccaacagggaaaagatgaca
cagatcatgttcgagaccttcaacacccccgccatgtacgttgccatccaggctgtgctg
tccctgtatgcctctggtcgtaccactggtatcgtgatggactctggtgatggtgtcacc
cacactgtgcccatctacgagggttatgccctgccccatgccatcctccgtctggacttg
gctggccgtgacctgactgactacctcatgaagatcctcaccgagagaggctacagcttc
accaccacagctgagagggaaattgtccgtgacatcaaggagaagctctgctatgtggct
cttgacttcgagcaggagatgggcactgctgcttcctcctcctccctggagaagagctat
gagctgcctgacggacaggtcatcaccattggcaatgagaggttcaggtgcccagaggct
ctgttccagccatccttcttgggtatggagtcttgcggtatccatgagaccaccttcaac
tccatcatgaagtgtgacgtcgatatccgtaaggacctgtatgccaacactgtattgtct
ggtggtaccaccatgtaccctggcattgctgacaggatgcagaaggagatcacatccctg
gcccctagcacaatgaaaatcaagatcatcgccccacctgagcgtaaatactctgtctgg
atcggaggttccatcctggcctccctgtccaccttccagcagatgtggattagcaagcag
gagtatgacgagtctggaccatccatcgtccaccgcaaatgcttctaa
DBGET
integrated database retrieval system