Ctenopharyngodon idella (grass carp): 127508372
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Entry
127508372 CDS
T08802
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide00514
Other types of O-glycan biosynthesis
cide04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
127508372
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
127508372
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cide01003
]
127508372
Enzymes [BR:
cide01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
127508372
Glycosyltransferases [BR:
cide01003
]
Glycan extension
O-Glycan
127508372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
127508372
NCBI-ProteinID:
XP_051742185
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All DBs
Position
3:36428274..36436598
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AA seq
374 aa
AA seq
DB search
MLKTYGRKAALSLAGATVTCLALLLFLSQHQRIQMDGMQNESEIGLRSLQSLGESELDDG
AQPEQNGKKGFSAYFSKLTRSKREADKTTEASGAATDAPPAEDISSDDIFIAVKTTKKFH
RSRLDLLLDTWISRNMQQTYIFTDGEDEELKKKIGSHAINTNCSAAHSRQALSCKMAVEY
DKFIESGKKWFCHVDDDNYVNVKTLVKLLSNYPHTQDMYIGKPSLDRPIEATERLGDNKM
RPVNFWFATGGAGFCISRGLALKMSPWASGGHFMNTAEKIRLPDDCTIGYIIESVLGVPL
TRSSLFHSHLENLQQVSKSEVHKQITLSYGMFENKRNIINMKGAFSVEEDPSRFKSVHCL
LYPDTPWCPPQVAY
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaacgtacggcaggaaagctgcgctctccctcgcgggagcgaccgtcacctgt
ctcgcgctactgttatttttgtcgcagcatcagcggattcagatggacgggatgcagaac
gagagtgagatcgggttgcgctcgctgcagagtctgggggaatcagagcttgatgatgga
gctcagcctgaacagaatgggaagaaaggattctctgcctatttttccaagctgacccgc
agcaagagggaagcggataagaccaccgaggcgtccggagcggcgacagacgcgccgcct
gctgaggacatcagctcggatgacatcttcatcgcagtgaagaccactaagaagtttcac
cggtccagactggatctactgctggacacctggatttccagaaacatgcagcagacgtac
atcttcactgacggcgaagatgaggaactaaagaagaaaattggaagccatgcaatcaac
accaactgctctgctgcccacagccgccaggctctgtcatgcaagatggccgttgagtac
gacaagttcattgagtccggaaaaaagtggttctgtcatgtggatgatgataactatgtg
aatgtgaagacattggtgaagttgctgtccaactaccctcacactcaggatatgtacatt
ggcaaacccagcttggacaggccaattgaagccacagaaagacttggggacaacaagatg
agacctgtcaatttctggtttgctacgggaggtgcaggcttctgtatcagccgtggacta
gctttgaagatgagcccttgggcaagtggtggccatttcatgaacactgccgagaagatc
cgtcttcctgatgactgtaccattggttacatcattgagtcagttcttggggttcctttg
acccggagcagcttgttccactcacacttggagaacctgcaacaggtgtccaaatcagaa
gtacacaaacagattacattgagctatggaatgtttgagaacaagaggaatattatcaac
atgaaaggggctttctctgttgaggaggacccatccaggtttaagtcagtgcactgtctg
ctgtatccagacactccgtggtgccctcctcaggttgcctattaa
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