KEGG   Ctenopharyngodon idella (grass carp): 127508908
Entry
127508908         CDS       T08802                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, A-Q alpha chain-like
  KO
K06752  MHC class II antigen
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide04145  Phagosome
cide04514  Cell adhesion molecules
cide04672  Intestinal immune network for IgA production
cide05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cide00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    127508908
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    127508908
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    127508908
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    127508908
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cide04147]
    127508908
Exosome [BR:cide04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   127508908
  Exosomal proteins of epithelial cells
   127508908
  Exosomal proteins of breast milk
   127508908
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 ig Ig_2 C2-set_2 I-set
Other DBs
NCBI-GeneID: 127508908
NCBI-ProteinID: XP_051743366
LinkDB
Position
3:complement(56127579..56145960)
AA seq 236 aa
MELYIIILTLTIVLSTDPEVKHEAFQFTLCSDTEGGFYLGYDEEEVWHVNFDQKTEVLTL
PDFTGPLTFDGFYERGLERLAKCQKNLLGYITGFKSPPPEIDAPHTSIYPKDDVQLGVQN
TLICHVTDFYPPSVSISWTKNNVNVTEGIRLSQYHPKTDGTFNIFSTMKFTPAEGDIYSC
TVNHIALQGQPQTKIWDFEVALPSVGPAVLCGVGLTVGLLGVTAGTFFFIKGNKCN
NT seq 711 nt   +upstreamnt  +downstreamnt
atggagctgtacataatcattctcacccttaccattgttctctcaactgatcctgaagtt
aaacatgaagctttccagtttacactatgctctgacacagaaggagggttttaccttgga
tatgatgaagaggaggtatggcatgtcaactttgatcagaagacagaagtattgacatta
cctgattttacaggacctttgacatttgatggattttatgaacgtggtttggaacgtttg
gcaaaatgccaaaaaaacttacttggctacattacaggtttcaagagcccaccaccagaa
attgatgcaccccatacatccatctatccaaaggatgatgtacagctgggtgttcagaat
actctcatctgtcatgtgactgacttctatccaccatctgtcagcatctcttggactaag
aataatgttaatgtgacagagggcatacgtttaagccagtaccatccaaagacagatggt
accttcaacatcttctccactatgaaatttacacctgctgaaggagacatttacagctgc
acagtcaaccatatagccctccagggtcaacctcagaccaaaatatgggattttgaagtt
gccctcccaagtgttggtccagcagtgttgtgtggagtgggtctgactgtggggctgctg
ggtgtcactgctggaacattctttttcattaaaggaaataaatgcaactga

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