Ctenopharyngodon idella (grass carp): 127509066
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Entry
127509066 CDS
T08802
Name
(RefSeq) sodium channel protein type 4 subunit alpha B
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cide04040
]
127509066
Ion channels [BR:
cide04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
127509066
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
127509066
NCBI-ProteinID:
XP_051743497
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All DBs
Position
3:complement(23027464..23061481)
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AA seq
1833 aa
AA seq
DB search
MPKRKINLLEVWRRNRAAHPNRAKNLKLWPRQLAQLRDPEVVAALVQQNVKMARLLPPTG
TDVFHPFTLESLAEIERRMAEEAAEQEQMKAQNIEVAEEDLPKPTSDLEAGKALPFIYGD
PPPKLLNVPLEELDPFYKAKKTFIVITKGNTIYRFNAEPACYILSPFNPVRRVAIRILIH
SLFSMFIMLTILSNCVFMTMSDPPPWSKTVEYVFTGIYTFEALVKVLSRGFCIGDFTFLR
DPWNWLDFMVISMAYLTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKKL
ADVMILTVFCLSVFALIGLQLFMGNLRQKCVRWPPFGWSDNLTTLFDHTDVNGTEAANST
FNYQEYIENTGNYYYVPGHMDPLLCGNNSDAGRCPEGFLCLKAGQNPNYGYTSYDTFAWA
FLALFRLMTQDFWENLFQLTLRAAGKTYMIFFVVIIFLGSFYLINLILAVVAMAYAEQNE
ATIAEAKEKEEEYAKILELLKKQAEQKNGMVNGSRTSLSTKKKGDDDQMQSDHDGIALKP
LSKSNGSNGSMNYLEVPESQMRKQSAVSATDNALDEMDDIQRPCPPCWYKFADIFLKWDC
CVPWVKFKKLMYLIVMDPFVDLGITICIVLNTVFMAMEHYPMTQDFDHILAVGNLVFTGI
FTAEMVLKLIALDPYYYFQVGWNIFDSIIVTMSLVELGLANVEGLSVLRSFRLMRVFKLA
KSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKISESCVLP
RWHMTDFFHSFLIIFRVLCGEWIETMWDCMEVAGQGMCIIVFMMVMVIGNLVVLNLFLAL
LLSSFSGDNLAASDDDGEMNNLQIAISRITRGIDWVKAFVISHVRQCLGLKPKEEGANAN
EEGDSKMANMDSSLSVIKVPIANGESDYDDGNSSSEDEDKEGADKNTKKTDGDESSYCST
VDKPPEVELVEEVEEVDSTIPEDCYTENCIRRCPCLELDVTLGKGRAWWNFRKTCYAIVE
HSYFETFIIFMILLSSGALAFEDIYIEQRRMIKIILEYADQVFTYVFVIEMLLKWIAYGF
KVYFTNAWCWLDFLIVDVSLISLTANILGYSELGAIKSLRTLRALRPLRALSRFEGMKVV
VNALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYYCFNETSESAFLPTEVNNKSDC
LELSEADPNVRWMNMKVTFDNVGMGYLSLLQVATFKGWMDIMYSAVDSRDVEMQPDYESN
LYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKAKLGGTDIFMTEEQKKYYNAMKKLGS
KKPQKPIPRPTNCFQGLVFDLVTKQFFDIFIMVLICLNMITMMVETDDQSEEVEYILFMI
NFVFIVLFTGECILKIIALRYHYFSIGWNIFDFVVVILSILGLLLADLIEKYFVSPTLFR
VIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVK
KEAGIDDMFNFETFGNSIICLFMITTSAGWDGLLSPILNNPPDCDPDVVNPGSPVRGNCG
NAAVGIVFFCSYIVMSFLVVVNMYIAIILENFNVATEESSDPLCEDDFEMFYETWEKFDP
DASQFINYSRLSEFCDTLKDPLRIPKPNTLKLITMDLPMVPGDKIHCLDILLALTTEVLG
DSGQMDAMKATMEEKFMANNPSKVSYEPITSTLRRKQEEVAASTIQKAYRAHVLKRCLKH
ASHMYREKTDSKGKEEEAPEKEGMIAKKMTYLYGDQTIEEYKPVVFSFSQRGKTQPLAKR
PPVKVQSDVVLHSAPFPLPDSSTAEDKLKESMV
NT seq
5502 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcgaaagataaacctgttggaggtttggcgtaggaaccgtgctgctcaccca
aacagagctaagaacctaaaactatggcctcgtcaactggcacaattgagagaccccgaa
gtggtggcagccctcgttcagcagaatgtcaagatggcacgcctactccctcccacaggc
accgatgtgttccaccccttcactttggagtcgctcgccgagatcgagcggcgaatggca
gaagaagccgccgagcaggaacagatgaaggcccagaatattgaggtggctgaggaggat
ctgcccaaacccaccagtgatttggaagcaggaaaagccctaccgttcatctacggagac
cctccaccaaagctcctcaatgttcctcttgaagagttagatccgttctacaaagcaaaa
aaaacgttcatcgtgatcaccaaagggaataccatatacagattcaatgctgaacctgcc
tgctacattctaagtcccttcaaccctgttcgacgagtagccataagaatactcatacat
tcattgtttagcatgttcatcatgttaaccatcttgtcaaactgtgtgttcatgacgatg
agtgaccctccaccctggagcaaaacagtagagtacgttttcactggcatctacaccttt
gaggcattggtaaaggtcctttccagaggcttctgcattggtgatttcacattcctacga
gacccgtggaattggctggatttcatggtcatcagcatggcgtacctcacagagtttgtg
gacttggggaatgtatccgctctgaggactttccgtgttctccgtgccctgaaaacaatt
actgtaattccaggtctaaaaaccattgttggcgccctgattcagtcggtgaagaaactg
gcagatgtcatgatcctcaccgtcttctgtctcagcgtgtttgctctcattggcctgcaa
ctgttcatgggtaatttgcggcaaaagtgtgtcagatggcctccatttggctggagcgac
aacctgaccacgctcttcgatcacacagacgtcaatggcactgaagctgccaacagcact
ttcaactaccaggaatatattgaaaatacaggaaactactactatgtgcctggccatatg
gatccattactttgtgggaacaactctgatgcagggaggtgccctgaggggttcttatgc
ctgaaagctggccaaaacccaaattatggctacactagttatgacacctttgcttgggct
ttcttagcccttttccgtctaatgactcaagacttctgggagaacttgttccagttgacg
ctccgtgcagcagggaagacatacatgatcttctttgtagtcatcatcttcttgggttca
ttctacctcatcaatctgattctggctgtggtggccatggcgtatgctgaacagaatgaa
gccaccattgcagaagctaaagaaaaggaggaagagtatgcaaaaatcctggaactgctc
aagaaacaagctgagcagaagaatgggatggtaaatggcagcaggacgtcactatccacc
aaaaagaaaggcgatgatgaccaaatgcagagtgaccatgatgggatcgcattgaaaccc
ctctcaaaatcgaatggatccaacggcagcatgaattacttggaagtccctgaatcgcag
atgagaaaacagagtgcagtgagcgctacagacaatgctttagatgagatggacgatatt
caaaggccatgtcctccctgctggtacaagtttgcggacatattcctgaaatgggattgc
tgcgtgccatgggtgaaatttaagaaattaatgtacctaattgtaatggacccttttgtg
gatctgggcatcaccatctgcattgtgctcaacacagtgttcatggctatggagcactat
cccatgactcaagatttcgatcacattttggcggttggaaacctggttttcacaggtatc
tttacagcagagatggtgctaaaacttattgcactggacccatattattacttccaggtt
ggctggaacatttttgacagcataattgtgaccatgagcctggtggagttgggcttagcc
aatgttgagggcttgtctgtgctgaggtccttccgtctgatgcgtgtgttcaagctggca
aagtcttggccaaccctaaacatgctgataaagataatcggtaattctgtgggtgctctt
ggaaacctgacccttgtcctggccattattgtcttcatctttgctgtggtggggatgcag
ctttttggaaagagctacaaggagtgtgtgtgtaagatttctgagagttgcgtcctccct
cgctggcacatgacagatttctttcactcgttcctcatcatttttcgtgttctatgtggg
gaatggatcgaaacaatgtgggactgcatggaggtggctggccaaggaatgtgcatcatc
gtcttcatgatggtcatggttataggaaacctcgtggtgttgaatctcttcctggctttg
ctgctcagctctttcagcggggacaacctggcagcatctgatgatgatggggagatgaac
aatctgcagattgccatttctagaatcacaagaggcattgactgggtaaaggccttcgtt
atcagtcatgtgagacagtgtctgggcctgaagccaaaggaagagggtgcgaacgcaaac
gaggagggtgattctaaaatggccaacatggattccagtctgtccgttatcaaagtgcca
atagccaatggtgaatcggattatgatgatggcaacagctcttctgaggatgaagacaaa
gaaggcgctgataaaaatactaaaaagacagatggagatgaatcgtcatactgcagcact
gtggacaaacctcctgaggtagaactggtagaagaggtggaagaagtggactccaccatc
cctgaggactgctacacagagaactgcatcaggcgatgtccttgcttggagcttgatgtt
accctgggtaaagggagggcatggtggaacttccgtaaaacctgctacgccattgtggag
cacagctattttgaaaccttcatcatcttcatgattctcctcagcagtggagctttggca
tttgaggacatatatatcgaacaacggagaatgattaaaatcattcttgaatatgcagat
caggtcttcacctatgtgtttgtcattgagatgcttctgaaatggatagcctatggtttc
aaggtctatttcacaaacgcatggtgttggctggactttctcatcgttgatgtgtccctg
atcagcttgactgcaaatatcttaggctactctgaactgggggccattaagtctctcagg
actttgagagcgcttagacctcttcgagctctctccaggtttgaaggaatgaaggtcgtg
gtgaacgccctggtgggggccatcccctccatcttcaacgttctcctggtgtgcctaatc
ttttggctcatcttcagcatcatgggagtcaacctttttgctggaaagttctactattgc
ttcaatgaaacatccgaatcagctttccttcccactgaggtcaacaataagagtgattgc
ctggagctctctgaggctgatccaaatgtgcgatggatgaatatgaaggtcacctttgat
aatgtaggcatgggctacctctccttactgcaagtggcaacatttaagggatggatggac
atcatgtatagtgctgtggattcccgtgacgttgaaatgcagccagactatgagtcaaac
ctctacatgtacatttactttgtgatcttcatcatttttggctctttcttcaccctcaat
ctattcattggtgtcatcattgacaatttcaaccaacaaaaagcaaagttaggaggaacg
gacatcttcatgacagaagagcagaaaaaatactataatgctatgaagaaacttggctcc
aaaaagccacagaaaccaattccaaggcctacgaactgcttccaaggcttggtattcgac
ctggtcaccaagcaattctttgacatctttattatggtgttgatctgcctgaacatgatc
accatgatggtggagacggatgaccagagtgaagaggtggaatatattctgttcatgatc
aacttcgtcttcatcgtgctcttcaccggggagtgcattctcaagatcatagccctgcgc
tatcactacttctccattgggtggaacatttttgattttgtggtggtcattctttcaatc
ttaggtcttttgctggcagacctcatcgagaagtactttgtgtcacctacgctgtttcgc
gtcatccgactggccagaattggccgcgtcctgcgtcttatccggggtgcgaaaggaatc
aggacgttactgtttgcactgatgatgtcacttcctgccctcttcaacattggcctcctc
ctgttcttaatcatgttcattttctccatattcggcatgtccaactttgcgtatgtgaaa
aaagaagcaggcatcgatgacatgtttaatttcgagaccttcgggaacagtatcatatgt
ttgttcatgatcacgacgtctgcaggctgggatggactgttgtcgcctattctcaacaat
ccaccagactgcgacccggatgtggtgaacccgggatcgcctgtccggggaaactgcggg
aatgccgcggtgggcatcgtctttttctgcagctacattgtcatgtccttcctcgtcgta
gtcaacatgtacatagccattatcctggaaaacttcaacgtagcgacggaagaaagcagc
gaccccttgtgcgaggacgacttcgagatgttctacgaaacctgggagaaatttgacccc
gacgcttctcagttcatcaattacagtagactgtctgaattctgcgacacgctgaaagac
cccctgagaatcccgaaaccgaacacattgaagttgatcacaatggaccttcccatggtt
cctggtgataagatccactgtctggacatcctcctggccctcactacagaggtgctgggt
gattctggccagatggatgccatgaaagcaactatggaggagaagttcatggcgaacaac
ccctcgaaggtttcgtacgagcccatcaccagcactctcagacgtaagcaagaagaagtg
gccgcttcgaccattcaaaaagcctaccgcgcacacgttctcaaacgctgcctcaaacac
gcctcgcatatgtacagagagaagacggactcaaagggaaaagaagaagaggctccggag
aaagagggaatgattgctaagaaaatgacgtatctttatggagatcagaccattgaggaa
tacaaacctgtggttttctctttctctcaacgtgggaaaacacagcccttggctaagcgt
cccccggtgaaggttcagagcgacgtggtcttgcactctgccccatttccccttcctgac
tcctcaaccgctgaggataagttgaaggagtccatggtgtag
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integrated database retrieval system
