KEGG   Ctenopharyngodon idella (grass carp): 127510875
Entry
127510875         CDS       T08802                                 
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
  KO
K02084  apoptotic protease-activating factor
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide04115  p53 signaling pathway
cide04210  Apoptosis
cide05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cide00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    127510875
   04115 p53 signaling pathway
    127510875
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    127510875
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 WD40_Prp19 WD40_WDHD1_1st APAF1_C WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st WHD_APAF1 WD40_Gbeta Beta-prop_CAF1B_HIR1 NB-ARC Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_EML ANAPC4_WD40 WDR90_beta-prop_4th CARD Beta-prop_IFT122_1st Beta-prop_TEP1_C NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_WDR41 RMC1_N WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_Aladin Beta-prop_EIPR1 Beta-prop_Vps41 eIF2A Beta-prop_WDR35_TULP_N Ge1_WD40 PEP5_VPS11_N Beta-prop_Nup120_160 AAA_16 CARD_2 Beta-prop_WDR11_2nd Tricorn_N NACHT DUF2677 nSTAND6 nSTAND_NTPase5 WHD_Dark
Other DBs
NCBI-GeneID: 127510875
NCBI-ProteinID: XP_051746968
LinkDB
Position
4:complement(7089514..7115654)
AA seq 1299 aa
MEERARSCLLRSKDTLEQDIKASYLMDHMVSDGVLSNDEEAMVLNKATRREQAAALLEVL
LRKDNRAYISFYNALIRESYGDLANLLHSDLPLLSPEGERSFADGVSPSVQAILSEGGVP
QRPVVFVSRPALLNLIRQMLYQLQNTPGWVIVFGMAGSGKSVMAAEAVRDHALIKECFPG
GVHWLSVGQCERADLLVRMQSLCFRLEQGQSLEASLRPPCSVEEAKERLRFLILRRFPRS
LLILDDVWDSYALRSFDIQCRVLLTTRNRGLADSVSGTRLEVPVESGLEEEKALEILALY
VNGKPHALPEQARSIVSECKGSPLVVSLIGALLREFPDRWSYYLRQLQKKQFKRIRKSSS
YDYEALDQAMDASLQVLEPGHRELYRDLSIMQKDIKVPAKVLSVLWGLELEEVEDVLQEF
VNKSLLFRDCNQRPYLYYLHDLQLDFLTELNRDQIAELHKKMVRQYQQFYNESPPSSGDK
ECSYWYHFLPYHMAKAGLSKELYSLMFSLDWVKEKAQIMGSAHLINDYVEYGEILDKENS
EVRLQFQEFLSLNGHQLEQRPFPDIIQLALSQPACSEVYRQALMQAQKRASRGQLYLDWV
NKNSQDSLSRLVMHPHQGSVYYACFSKDGSKIASCGASKKLRVFKTTSGEKLLELQAHDE
DILCCAFSPDDRYIATCSSDRKVKLWNVERGILMKVFAEEHEEQINHCQFTNTGRRFLLA
TCSNDKFTNTKIWNPNKRTSQNTMFGHMEPVNHCCFSPNDVYLATSSSDGTVKLFEVSSA
NEWKSIDVSSFFPESDDEIKAIVKCSTWSADSSRIICAARNAVFVFDVQTSDMLLEMKTS
RLSTVQYCHACPNSSLLAVALSHYAVELWNLETSKKKAECNGHLSWVHCVQFSPDGSLLL
SSSDDQTIRLWETDRVHTSSAVALKRDTDVIFSHSHVTIVAPDSKNRLQVRAESKGAVLY
ESEALPSRIRCTCISRNAAFVSLGTEDGTVQTGRVKVRQFLKNVGWRTLQLLNLQRDFVL
ALGLEAGTVQVFEVPSGKTVKLLGHTRTVHHCRFTDDSETLITSSEDATVRVWKWRTGEC
LVLEGHTEPIRKFHLLNSSSPPHLFSWSFDGTVKVWDLDRGQMLQDLVCHKGAVLSCDAS
PDGRLFATASADRTAKVWSRTSWEVMFLLKGHKDCVRSCRFSWDNKRLATGDDNGEIRLW
SMLDGALLKICSRDTKDSMDSFHGGWVTDLHFSPDNRVLVSTGGYIKWWSVETGEALQTF
YTMGANLKKIHVSPDFTTFLTVDSIGILYVLKKVEGGGI
NT seq 3900 nt   +upstreamnt  +downstreamnt
atggaggaacgtgctcgcagctgtctgctgcgctccaaagacactctggagcaggacatc
aaagcctcctacttgatggaccacatggtcagcgatggcgtcttgagcaatgatgaagaa
gcaatggtgctcaacaaggccactagaagagagcaggccgcagccctgctcgaggtgctg
ttgaggaaagataacagggcatacatctccttctacaacgcactgatcagagagagttac
ggagatctagccaacctccttcatagtgacctgcctctgctcagccctgagggagagagg
agctttgctgatggagtgtctccttctgtccaggcgattctgagtgaaggtggggtgcct
cagagacccgtggtgtttgtgagccgacccgctctgctgaacctgatccggcagatgctg
taccagctacagaacacaccggggtgggttatagtgtttggcatggcgggttcagggaag
tctgtgatggctgctgaggctgttcgggaccatgccctcattaaggagtgttttccaggt
ggtgttcactggctttctgttggccaatgtgagcgggcagacctgctggtaaggatgcag
tctctatgtttccgtttggagcagggtcaaagtttagaagccagcctgcggccaccctgt
tctgtggaggaggccaaagagcgcctgcggttcctaatactccgcaggttccccaggtcc
ctgctgattctggacgatgtctgggacagctatgcactcaggtcctttgatattcagtgc
cgagttcttctgaccacgcgcaaccgaggtctggctgactccgtaagcggtacaaggtta
gaagtgcctgttgaaagcggtctagaggaggagaaagccttggaaattcttgctttgtat
gtcaatgggaagccacatgcacttccagaacaggcccgcagcattgtgagcgaatgtaaa
ggttctcctttggtggtttctctgattggagctctgttgagggagttccctgaccgctgg
agctactaccttcggcagctgcagaagaagcaattcaagcggatccgtaagtcatcgtcc
tacgactatgaagctctggaccaggccatggatgccagcctgcaagttctggagcctgga
cacagagaactatacagagacctgagcatcatgcagaaagacattaaagtgcctgctaag
gttctatcggtgctgtggggtcttgagttggaggaggtggaggatgtcctacaggaattt
gtgaataaatccctgctgtttcgggactgtaaccagcgaccgtatctctattaccttcat
gatctgcagctggactttctcactgaactgaatcgtgatcaaattgctgaactacataaa
aagatggtccgtcaataccagcagttctacaatgaaagcccaccgagctctggagataaa
gaatgttcgtattggtaccacttcctcccgtaccacatggctaaagcgggactgtctaag
gagctttattcactgatgttttctttggactgggtcaaagaaaaagctcagattatggga
tctgcccatctgatcaatgactatgtagaatatggtgaaatactagacaaagagaatagt
gaggtgagactgcagtttcaggagttcctctctctgaacggacatcagctggagcagaga
ccgtttcctgatatcatacagttggctctgtctcagcccgcgtgctccgaggtttacagg
caggccttgatgcaagcgcagaaaagagccagcagagggcagctctatctggattgggtg
aacaaaaatagtcaggacagtttgtcccggctggtcatgcatcctcaccaggggtctgtc
tactacgcctgcttttccaaagatgggagtaaaattgcctcttgtggggccagcaagaag
ctgcgggtgtttaaaacgacctctggagagaaacttctggagcttcaggctcatgacgaa
gatattctgtgctgcgccttctctcccgatgaccgttacatagcaacctgctccagtgac
aggaaggttaagttgtggaatgttgagcgaggtattcttatgaaagtgtttgcggaggaa
catgaggaacagataaaccactgccagttcaccaacacaggccgacgtttcctgctggcc
acctgctcaaatgacaaattcactaacaccaagatatggaaccccaacaagcggacgtct
caaaacactatgtttggacacatggaacccgtcaatcactgctgcttctcccctaatgac
gtctacctcgccacttcatctagtgacggcaccgtgaagctgtttgaggtgtcatccgcg
aacgagtggaaatcaatcgatgtcagtagttttttcccagagagtgatgatgaaataaaa
gccattgtgaaatgcagcacttggtcagctgacagctcacggataatttgtgctgccagg
aacgctgtgtttgtgtttgacgtacagacatcagacatgctgctggaaatgaagacgagt
cgtctgagcacagttcagtattgccacgcgtgtcccaacagcagcctgttggccgttgcg
ctctctcattacgctgtagagctgtggaatcttgagaccagtaaaaagaaagccgaatgc
aacggtcacctgagctgggttcattgtgtccagttttcacctgacggctcacttctgctg
tcctcttctgatgatcagactatcagactgtgggagacggaccgggttcacacctcctct
gctgtggctctgaagagggacactgatgttatcttctcccatagtcatgttacaatagtg
gcacctgacagcaaaaaccgattacaggtacgggctgaatccaaaggtgccgttttgtac
gagagtgaagcattgccgtccaggattcgctgtacttgtatcagcagaaatgcagctttt
gtgtccctgggaactgaggatggaactgtacagacaggaagagtgaaagttagacagttt
ctgaagaacgttggatggagaaccttgcagctgctgaacttacagcgcgattttgtgctg
gcactagggctagaggcaggtacagtgcaggtgtttgaggttccatcgggaaaaacggtg
aagctcttgggtcacaccaggactgttcaccactgtcggttcactgacgacagtgaaacc
ctcatcacatcctcagaagatgctactgtccgggtgtggaagtggaggacaggtgagtgt
ctggtgctggagggtcatacggagccaatcaggaagtttcaccttttaaactcctcttcc
cctcctcatctattctcatggtcgtttgatggcactgttaaggtctgggatttggacaga
gggcagatgctgcaagaccttgtgtgtcataagggtgctgtcctgtcatgtgacgcgtct
cctgacggacggctctttgccacagcttcggccgataggactgctaaggtgtggagcagg
acctcatgggaggtgatgtttttgctgaagggacacaaggactgcgtccgtagctgccga
ttttcttgggacaacaagcgacttgcaactggcgatgacaacggagaaataaggctgtgg
agcatgctggatggagctctcctgaagatctgttcccgggacactaaggattcaatggac
tctttccacggtggatgggtgaccgacctgcacttctcccctgataacagagtactcgtc
tctactggcggatacatcaagtggtggagcgttgagacgggagaggccctgcagacattc
tacacgatgggtgccaatctgaagaagattcatgtatcacctgatttcaccacctttttg
actgtggacagcattggaatcctttatgttttaaagaaagtggagggaggaggaatttag

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