KEGG   Ctenopharyngodon idella (grass carp): 127511241
Entry
127511241         CDS       T08802                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain-like
  KO
K06752  MHC class II antigen
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide04145  Phagosome
cide04514  Cell adhesion molecules
cide04672  Intestinal immune network for IgA production
cide05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cide00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    127511241
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    127511241
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    127511241
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    127511241
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cide04147]
    127511241
Exosome [BR:cide04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   127511241
  Exosomal proteins of epithelial cells
   127511241
  Exosomal proteins of breast milk
   127511241
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 Ig_3 C2-set_3 Ig_2
Other DBs
NCBI-GeneID: 127511241
NCBI-ProteinID: XP_051747993
LinkDB
Position
4:24205712..24207453
AA seq 264 aa
MNQFHLTHAEMGKPSVSKRLYLCFILIVSAFSGTEEYYNSQWLQCIYSSPDLSDVVYISS
YVFNKAVVSEFNSTLGKFVGYTEYGMRNAEYWNNNTNILQGMKADLDNFCKHNAEIYNSY
IRDKTEKPKIKLRSVKQAGGKHPAVLVCSAYDFYPERIKMSWTRDGKEVNADVTSTEEQA
DGDWYYQIHSHLEYTPRSGEKISCVVDHASSTQPIITDWDPSIPEPERNKIVIGASGLVL
GVILAAAGLIYYKKKSAGRTLVPH
NT seq 795 nt   +upstreamnt  +downstreamnt
atgaatcaatttcatttgacacatgcagaaatggggaaaccatcagtttctaagcgcttg
tatttatgtttcatattgattgtttctgctttcagtggcacggaggagtattacaattcc
cagtggttacaatgcatctacagttcacctgatctaagtgatgtggtatacatcagttct
tatgtcttcaacaaagctgtggtatcagagttcaacagcactctggggaagtttgttgga
tatactgagtatggaatgagaaatgctgagtactggaacaataacaccaacattctacag
ggaatgaaagctgacttggacaatttctgcaaacataatgctgaaatttataactcttac
atccgtgataaaaccgagaagccaaaaatcaaactgagatcagtgaagcaggctggtggc
aagcatccggcagtgttggtgtgcagtgcatatgatttttaccctgaacgaatcaaaatg
tcctggacaagagatggtaaagaggtgaacgctgatgtgacatccactgaggagcaggct
gatggggattggtactaccagatacactctcaccttgaatatacacccagatctggagag
aaaatctcctgtgtggtggatcatgccagctccactcaacccatcatcacagactgggat
ccctctatccctgagcctgaaaggaataaaattgtcatcggggcatcaggtctggtgctg
ggagtcatcttagcagctgctggactcatttactacaagaagaaatcagcagggaggaca
cttgtaccacattaa

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